RNA–Protein interactions for RNA: ENSMUST00000202945.3

Ube3a-216, Transcript of Ubiquitin-protein ligase E3A, mousemouse

TSL 1 (best) BASIC

Gene Ube3a, Length 3,889 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3a-216ENSMUST00000202945 FynP39688 537 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Slc9b2Q5BKR2 547 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Msi1Q61474 362 aaKnown RBP13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Nipal1Q8BMW7 416 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Amz1Q8BVF9 502 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Tmem82Q8R115 356 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Cyp4f16Q99N17 524 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Rec114Q9CWH4 259 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Atp6ap2Q9CYN9 350 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Ddit4Q9D3F7 229 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Fbxl18E9PYR1 771 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Herc6F2Z461 1003 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Kcnj6P48542 425 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Cd163Q2VLH6 1121 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Cpa4Q6P8K8 420 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Abraxas1Q8BPZ8 407 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Galnt5Q8C102 930 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Sept10Q8C650 452 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Sik2Q8CFH6 931 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Sytl2Q99N50 950 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Eef1akmt2Q9D853 244 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Gsdmdc1Q9D8T2 487 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Poc5Q9DBS8 558 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 DgkeQ9R1C6 564 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Zfp236S4R299 1847 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Gm3739L7N296 216 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 NoctO35710 429 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 DcxO88809 366 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Krt10P02535 570 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Eno3P21550 434 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Tubgcp3P58854 905 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Faf2Q3TDN2 445 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Phf12Q5SPL2 1003 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 XiapQ60989 496 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Slc17a6Q8BLE7 582 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Rd3Q8BRE0 195 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Sbk1Q8QZX0 417 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 HnmtQ91VF2 295 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 CtsrQ9JIA9 334 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Bscl2Q9Z2E9 383 aa13.66□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Ttc30a2A2AKQ8 664 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Gm5483B2RV77 97 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 LmnaP48678 665 aaKnown RBP13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Krt26Q3TRJ4 462 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Q3U4G0 281 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 WhammQ571B6 793 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 UrgcpQ5NCI0 926 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 PrkciQ62074 595 aaKnown RBP13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 SnrpaQ62189 287 aaKnown RBP13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Mea1Q64327 174 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Got1l1Q7TSV6 404 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Best2Q8BGM5 508 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Clec1aQ8BWY2 269 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Zfp263Q8CF60 680 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 HpdlQ8K248 371 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Wrnip1Q91XU0 660 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Dok4Q99KE3 325 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Rin2Q9D684 903 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Plscr2Q9DCW2 307 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Abcb9Q9JJ59 762 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 C1qtnf1Q9QXP7 281 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Fam71e2L7N480 754 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Adam15O88839 864 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Gpd1lQ3ULJ0 351 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Fbxw8Q8BIA4 598 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Lrrc19Q8BZT5 364 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Ccdc28bQ8CEG5 200 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Sgip1Q8VD37 806 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Usb1Q91W78 267 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Eif2b2Q99LD9 351 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Fam162aQ9D6U8 155 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 NumbQ9QZS3 653 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Pcdh7A0A0A6YY83 1255 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Rhox3fA2ANE1 215 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Olfr743L7N1Y2 311 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Pax3P24610 479 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Pecam1Q08481 727 aaKnown RBP13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Foxred2Q3USW5 665 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Trim67Q505D9 768 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 JrkQ60976 557 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Smarcd1Q61466 515 aaKnown RBP13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Dusp11Q6NXK5 321 aaKnown RBP13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Olfr1046Q7TR79 316 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Pdk1Q8BFP9 434 aaKnown RBP13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Tbc1d10bQ8BHL3 798 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 ClmnQ8C5W0 1052 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Spag16Q8K450 639 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Cog2Q921L5 731 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Msh5Q9QUM7 833 aa13.65□□□□□ -0.22
Ube3a-216ENSMUST00000202945 Btbd35f15A0A087WR44 498 aa13.65□□□□□ -0.23
Ube3a-216ENSMUST00000202945 Btbd35f12A0A0A0MQP3 498 aa13.65□□□□□ -0.23
Ube3a-216ENSMUST00000202945 Ankrd16A2AS55 361 aa13.65□□□□□ -0.23
Ube3a-216ENSMUST00000202945 Btbd35f9A2BFZ7 498 aa13.65□□□□□ -0.23
Ube3a-216ENSMUST00000202945 Btbd35f7A2BHG6 498 aa13.65□□□□□ -0.23
Ube3a-216ENSMUST00000202945 Btbd35f19A2CG71 498 aa13.65□□□□□ -0.23
Ube3a-216ENSMUST00000202945 Btbd35f10A2CG92 498 aa13.65□□□□□ -0.23
Ube3a-216ENSMUST00000202945 Btbd35f3A2CGC2 496 aa13.65□□□□□ -0.23
Ube3a-216ENSMUST00000202945 Btbd35f13B8JKF6 498 aa13.65□□□□□ -0.23
Ube3a-216ENSMUST00000202945 Trim30bE9PVL6 203 aa13.65□□□□□ -0.23
Ube3a-216ENSMUST00000202945 Btbd35f2J3QMS5 498 aa13.65□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms