RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Panx1Q9JIP4 426 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 GcatO88986 416 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Prl2c3P04768 224 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Pqlc1Q80XM9 271 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Slc9a7Q8BLV3 726 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Mrpl48Q8JZS9 211 aaKnown RBP16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 GcshQ91WK5 170 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Abcb9Q9JJ59 762 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 P2rx7Q9Z1M0 595 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Cyp2c40P56657 491 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Zfp217Q3U0X6 1041 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Trafd1Q3UDK1 580 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Trpv1Q704Y3 839 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Edf1Q9JMG1 148 aaKnown RBP16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ptrhd1D3Z4S3 140 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Mib1Q80SY4 1006 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Klhl32A2AJX0 620 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ccnb1P24860 430 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Rab12P35283 243 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Nkx2-5P42582 318 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 BspryQ80YW5 473 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Snrnp48Q9D361 337 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Lipo2D3YY49 398 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Slc16a2O70324 545 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Prdx3P20108 257 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gstm5P48774 224 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Nipa1Q8BHK1 323 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Rbm22Q8BHS3 420 aaKnown RBP16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Lgi2Q8K4Z0 550 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Vmn1r206Q8R277 312 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Pin4Q9CWW6 131 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Zw10O54692 779 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Pola2P33611 600 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Zfp78Q5U406 512 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Olfr1057Q7TR75 315 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Asb7Q91ZU0 318 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Carm1Q9WVG6 608 aa16.79■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Pyroxd1Q3TMV7 498 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Slfn4Q3UV66 602 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Tubgcp5Q8BKN5 1024 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ppm1mQ8BU27 406 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Bscl2Q9Z2E9 383 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gm4450E9Q007 373 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gm5814J3QP80 125 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Il13ra2O88786 383 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gm4951Q3UED7 406 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Hsd3b4Q61767 373 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Mov10l1Q99MV5 1187 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Npm3Q9CPP0 175 aaKnown RBP16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Snrpb2Q9CQI7 225 aaKnown RBP16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Cdk20Q9JHU3 346 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ndufs6P52503 116 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Akr1c6P70694 323 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Atg4cQ811C2 458 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Klhl26Q8BGY4 606 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gyg1Q9R062 333 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 CcniQ9Z2V9 377 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Nav1Q8CH77 1875 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gm6465F7A7Y6 181 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Fam89aQ14BJ1 175 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Brd9Q3UQU0 596 aaKnown RBP16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Zcchc2Q69ZB8 1166 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Q8BGN9 141 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Trappc12Q8K2L8 797 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 RykQ01887 594 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Kiaa0319Q5SZV5 1081 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Trit1Q80UN9 467 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Cnpy4Q8BQ47 245 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Rbms3Q8BWL5 431 aaKnown RBP16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Tmed11Q9D2R4 215 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Efcab9Q9DAM2 216 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Tmem115Q9WUH1 350 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Mad2l1Q9Z1B5 205 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Mroh1E0CZ22 1640 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Colec11Q3SXB8 272 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Gstt2Q61133 244 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Vps4aQ8VEJ9 437 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Pcdhgb2Q91XX7 928 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Efhc1Q9D9T8 648 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Usp49Q6P9L4 685 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Akt1s1Q9D1F4 257 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Taf1dQ9D4V4 322 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Prg3Q9JL95 222 aa16.78■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Glyatl3E9Q5L8 290 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Tnfaip1O70479 316 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Alkbh5Q3TSG4 395 aaKnown RBP16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Fam83eQ80XS7 481 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Il31raQ8K5B1 716 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Plscr1Q9JJ00 328 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Guca2bO09051 106 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ephb3P54754 993 aaKnown RBP16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Snx8Q8CFD4 459 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Epn2Q8CHU3 595 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Egfl7Q9QXT5 275 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Men1O88559 611 aaKnown RBP16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Rb1P13405 921 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Ccr1P51675 355 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 AdslP54822 484 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Rars2Q3U186 578 aa16.77■□□□□ 0.28
Ccdc88a-201ENSMUST00000040182 Cyp2c66Q5GLZ0 490 aa16.77■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms