RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Fam114a2Q8VE88 497 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Vangl2Q91ZD4 521 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 S100pbpQ9D5K4 396 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Olfr711Q9EPG2 314 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Morc1Q9WVL5 950 aa16.46■□□□□ 0.23
Trim28-201ENSMUST00000005705 Olfr1023A2ASU6 311 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Olfr652B9EHE6 318 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Vmn2r14E9Q759 848 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Pot1bH7BX60 640 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Gm3336J3QMQ6 198 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 AvilO88398 819 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 ChgbP16014 677 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Fam35aQ3UEN2 891 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Pcdhga7Q6DD96 935 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Senp5Q6NXL6 749 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Dyrk4Q8BI55 632 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Cdkn2aipQ8BI72 563 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Aste1Q8BIR2 672 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Zfp398Q8BV16 643 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Wdr59Q8C0M0 992 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Prpf39Q8K2Z2 665 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Olfr1325Q8VF43 315 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Lsm12Q9D0R8 195 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Scamp5Q9JKD3 235 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Vmn2r84D3YWE3 849 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Gm8257E9Q8R3 264 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Zbtb11G5E8B9 1050 aaKnown RBP16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Pim1P06803 397 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 SPINDOCQ05AH6 381 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Zc3h15Q3TIV5 426 aaKnown RBP16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Mtnr1aQ61184 353 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Mtmr10Q7TPM9 771 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Olfr297Q7TS07 310 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Snx9Q91VH2 595 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Cyp2c50Q91X77 490 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Srfbp1Q9CZ91 441 aaKnown RBP16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Eif4e3Q9DBB5 207 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Paqr5Q9DCU0 330 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Grm3Q9QYS2 879 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Abhd12bG3UZN6 359 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Dpy19l2P0CW70 773 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Crabp2P22935 138 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Fbp2P70695 339 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Gpr15Q0VDU3 360 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Clhc1Q5M6W3 596 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 9930111J21Rik1Q5SVP0 844 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Arhgap10Q6Y5D8 786 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Sytl5Q80T23 753 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Pqlc1Q80XM9 271 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Cept1Q8BGS7 416 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Bmp3Q8BHE5 468 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Ticam2Q8BJQ4 232 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tbc1d22aQ8R5A6 516 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Pcdha1Q91Y21 948 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tma16Q9CR02 221 aaKnown RBP16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Ndc80Q9D0F1 642 aaKnown RBP16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 Gpr45Q9EQQ4 373 aa16.45■□□□□ 0.22
Trim28-201ENSMUST00000005705 C1qbpO35658 278 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Cldn5O54942 218 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Dync1i2O88487 612 aaKnown RBP16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 JchainP01592 159 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 TnfP06804 235 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 FlgP11088 336 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Meaf6Q2VPQ9 191 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Parp3Q3ULW8 533 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Map3k10Q66L42 940 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Zpbp2Q6X786 326 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tmcc2Q80W04 706 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Oit3Q8R4V5 546 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Pcdhb13Q91Y06 796 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Slamf8Q9D3G2 278 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Asap1Q9QWY8 1147 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Gpc1Q9QZF2 557 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 A930018M24RikB7ZMY3 218 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 RxrgP28705 463 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 PpargP37238 505 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 PrkcgP63318 697 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Psmd8Q9CX56 353 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Dcp2Q9CYC6 422 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Cdh13Q9WTR5 714 aa16.44■□□□□ 0.22
Trim28-201ENSMUST00000005705 Cyp2j12G3UXT0 502 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 MycP01108 439 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 WapP01173 134 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Lamp1P11438 406 aaKnown RBP16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Aldh3a1P47739 453 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Rnf19aP50636 840 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Fitm2P59266 262 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Emilin3P59900 758 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Lpar1P61793 364 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Msx3P70354 204 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Adamts1P97857 968 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Sdr16c6Q05A13 316 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 HltfQ6PCN7 1003 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Entpd3Q8BFW6 529 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tdrd7Q8K1H1 1086 aaKnown RBP16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Serpinb10Q8K1K6 397 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Micu1Q8VCX5 477 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Pcdha11Q91Y19 950 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Asb7Q91ZU0 318 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 MutyhQ99P21 515 aa16.43■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms