RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Tsga13Q9DA17 273 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Bscl2Q9Z2E9 383 aa16.69■□□□□ 0.26
Shh-201ENSMUST00000002708 Gm44511A0A0N4SW10 223 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Klhl32A2AJX0 620 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Spin2dB1B0R2 236 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 EgfP01132 1217 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Klrb1bP27812 223 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Atp6v0d1P51863 351 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Acot8P58137 320 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Otud6aQ6IE21 290 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Slco6c1Q8C0X7 706 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Bhlhe22Q8C6A8 355 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Rps6kl1Q8R2S1 544 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Creld1Q91XD7 420 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Cdc26Q99JP4 85 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Fuca1Q99LJ1 452 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Chrnb2Q9ERK7 501 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Msgn1Q9JK54 188 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 DgkeQ9R1C6 564 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Bnip3lQ9Z2F7 218 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Casp8ap2Q9WUF3 1962 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Zfp882E9Q4R4 555 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 1700024B05RikE9Q6D7 167 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Ifi206G3UZV2 921 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Zbtb11G5E8B9 1050 aaKnown RBP16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Vmn2r44L7N2E1 861 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Dpysl2O08553 572 aaKnown RBP16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 OmdO35103 423 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 PtprcP06800 1291 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Polr1bP70700 1135 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Krt26Q3TRJ4 462 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Mettl17Q3U2U7 461 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Zfp956Q3UZY6 572 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 ScinQ60604 715 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 PtprrQ62132 656 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 ClmnQ8C5W0 1052 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Snapc1Q8K0S9 389 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Zcchc14Q8VIG0 956 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 DarsQ922B2 501 aaKnown RBP16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Ttc30bQ9CY00 664 aa16.68■□□□□ 0.26
Shh-201ENSMUST00000002708 Ankrd34aB2RW11 495 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Pdzd7E9Q9W7 1021 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Adcy1O88444 1118 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Klc2O88448 599 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 InvsO89019 1062 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Dpep1P31428 410 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Ephx2P34914 554 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Pitpnm3Q3UHE1 974 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Znf148Q61624 794 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Ptpn14Q62130 1189 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Tmem151aQ6GQT5 468 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Nomo1Q6GQT9 1214 aaKnown RBP16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Cd300lfQ6SJQ7 337 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Gabra5Q8BHJ7 463 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Atxn7l2Q8C8K6 696 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Psmd12Q9D8W5 456 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Nrf1Q9WU00 503 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Rnf19bA2A7Q9 732 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Gm3336J3QMQ6 198 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Ptpn1P35821 432 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 ClgnP52194 611 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Cdh5P55284 784 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Mc4rP56450 332 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 TankP70347 448 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Tigd3Q7TM95 470 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Atp2c1Q80XR2 918 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Timd2Q8R183 305 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Pcdha11Q91Y19 950 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Vangl2Q91ZD4 521 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Syap1Q9D5V6 365 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Grm3Q9QYS2 879 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Med20Q9R0X0 212 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Bmp15Q9Z0L4 392 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Shcbp1Q9Z179 668 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Pex11bQ9Z210 259 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Gria4Q9Z2W8 902 aa16.67■□□□□ 0.26
Shh-201ENSMUST00000002708 Dock1Q8BUR4 1865 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Vmn2r96E9PZU5 664 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Zscan4bE9Q3G0 505 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 TpteG5E8H5 664 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Slc6a13P31649 602 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 LmnaP48678 665 aaKnown RBP16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Pcbp1P60335 356 aaKnown RBP16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Chst10Q6PGK7 356 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Cspg5Q71M36 566 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Olfr293Q7TS10 336 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Cept1Q8BGS7 416 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Slc45a1Q8BIV7 751 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Wwp1Q8BZZ3 918 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Pde10aQ8CA95 790 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Amer2Q8CCJ4 672 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Fbxw7Q8VBV4 629 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Slc22a19Q8VCA0 551 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Pcdhga10Q91XY9 930 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Sntg2Q925E0 539 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Raver1Q9CW46 748 aaKnown RBP16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Kctd4Q9D7X1 259 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Znhit2Q9QY66 399 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Tbk1Q9WUN2 729 aa16.66■□□□□ 0.26
Shh-201ENSMUST00000002708 Prr14lE9Q7C4 1971 aa16.66■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms