RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 LRG1P02750 347 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 F11P03951 625 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 SLC6A4P31645 630 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 CDH4P55283 916 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 IL10RBQ08334 325 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 SERINC3Q13530 473 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 CRYMQ14894 314 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 SPANXN3Q5MJ09 141 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 TTC39BQ5VTQ0 682 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-216ENST00000641375 TMEM150AQ86TG1 271 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 CHD5Q8TDI0 1954 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 HERVK_113Q902F9 699 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 ZNF419Q96HQ0 510 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-216ENST00000641375 UBP1Q9NZI7 540 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 IRAK3Q9Y616 596 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 LAMA2P24043 3122 aaKnown RBP16.74■□□□□ 0.27
PHGDH-216ENST00000641375 TLL1O43897 1013 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 PEX11BO96011 259 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 KRT4P19013 534 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 SEC24CP53992 1094 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 TNK2Q07912 1038 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 NAB1Q13506 487 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 ADGRF1Q5T601 910 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 RFWD3Q6PCD5 774 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 TRMT10BQ6PF06 316 aaKnown RBP16.74■□□□□ 0.27
PHGDH-216ENST00000641375 CIR1Q86X95 450 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-216ENST00000641375 ANKRD42Q8N9B4 389 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 EMILIN2Q9BXX0 1053 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 GKN1Q9NS71 199 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 RPS6KL1Q9Y6S9 549 aa16.74■□□□□ 0.27
PHGDH-216ENST00000641375 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.73■□□□□ 0.27
PHGDH-216ENST00000641375 A0A1W2PPM1 405 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 J3KR12 359 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 CLDN11O75508 207 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 KRT38O76015 456 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 LATS1O95835 1130 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 SPATA31D3P0C874 917 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 MBL2P11226 248 aaPredicted RBP16.73■□□□□ 0.27
PHGDH-216ENST00000641375 MPP3Q13368 585 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 OLIG2Q13516 323 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 LILRA6Q6PI73 481 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 SPATA31D4Q6ZUB0 917 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 C4orf33Q8N1A6 199 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 ELMOD1Q8N336 334 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 SPATA22Q8NHS9 363 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 PABPC5Q96DU9 382 aaKnown RBP16.73■□□□□ 0.27
PHGDH-216ENST00000641375 MTBPQ96DY7 904 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 CHMP6Q96FZ7 201 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 CCT8L2Q96SF2 557 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 TBL1YQ9BQ87 522 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 TRIM56Q9BRZ2 755 aaKnown RBP16.73■□□□□ 0.27
PHGDH-216ENST00000641375 MCOLN1Q9GZU1 580 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 SLC25A51Q9H1U9 297 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 MAGEH1Q9H213 219 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 KIF9Q9HAQ2 790 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 ENTPD7Q9NQZ7 604 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 RWDD3Q9Y3V2 267 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 ZFP37Q9Y6Q3 630 aaPredicted RBP16.73■□□□□ 0.27
PHGDH-216ENST00000641375 DENND4CQ5VZ89 1909 aa16.73■□□□□ 0.27
PHGDH-216ENST00000641375 CXorf49A8MYA2 514 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-216ENST00000641375 KIF1CO43896 1103 aaKnown RBP16.72■□□□□ 0.27
PHGDH-216ENST00000641375 USP1O94782 785 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 MT-CYBP00156 380 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-216ENST00000641375 MT-ND3P03897 115 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 KLKB1P03952 638 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 SNRPAP09012 282 aaKnown RBP16.72■□□□□ 0.27
PHGDH-216ENST00000641375 BMPR1AP36894 532 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 SERPINB9P50453 376 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 MPP2Q14168 576 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 TMEM135Q86UB9 458 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 CFAP52Q8N1V2 620 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 TEX26Q8N6G2 289 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 MGARPQ8TDB4 240 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 MYEOVQ96EZ4 313 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 KLHL5Q96PQ7 755 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 TCF25Q9BQ70 676 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 FSD1LQ9BXM9 530 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 MTIF3Q9H2K0 278 aaKnown RBP16.72■□□□□ 0.27
PHGDH-216ENST00000641375 IL21Q9HBE4 155 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 ZNF334Q9HCZ1 680 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-216ENST00000641375 SMYD2Q9NRG4 433 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 HAUS2Q9NVX0 235 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 AGO1Q9UL18 857 aaKnown RBP16.72■□□□□ 0.27
PHGDH-216ENST00000641375 FAM237BA0A1B0GVD1 139 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 TYROBPO43914 113 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 IRF1P10914 325 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 CA4P22748 312 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 CNTFP26441 200 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 FRG1Q14331 258 aaKnown RBP16.72■□□□□ 0.27
PHGDH-216ENST00000641375 MARK2Q7KZI7 788 aaKnown RBP16.72■□□□□ 0.27
PHGDH-216ENST00000641375 CHST9Q7L1S5 443 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 CCDC117Q8IWD4 279 aaPredicted RBP16.72■□□□□ 0.27
PHGDH-216ENST00000641375 C7orf61Q8IZ16 206 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.72■□□□□ 0.27
PHGDH-216ENST00000641375 ZNF599Q96NL3 588 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 RABEP2Q9H5N1 569 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 TRPC7Q9HCX4 862 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 VPS45Q9NRW7 570 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 STOML2Q9UJZ1 356 aa16.72■□□□□ 0.27
PHGDH-216ENST00000641375 SPAG7O75391 227 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms