RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 ADGRD2Q7Z7M1 963 aa18.59■□□□□ 0.57
PHGDH-209ENST00000641074 OR52K1Q8NGK4 314 aa18.59■□□□□ 0.57
PHGDH-209ENST00000641074 PBX4Q9BYU1 374 aa18.59■□□□□ 0.57
PHGDH-209ENST00000641074 SMG9Q9H0W8 520 aaKnown RBP18.59■□□□□ 0.57
PHGDH-209ENST00000641074 MAGEH1Q9H213 219 aa18.59■□□□□ 0.57
PHGDH-209ENST00000641074 HCFC2Q9Y5Z7 792 aa18.59■□□□□ 0.57
PHGDH-209ENST00000641074 TCRBV9S1A1TA0A576 114 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 SDR42E2A6NKP2 422 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 GFRA2O00451 464 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 PRAMEF11O60813 436 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 NEBLO76041 1014 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 FGF19O95750 216 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 AGTP01019 485 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 NR1D1P20393 614 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 MGAT1P26572 445 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 IFNAR2P48551 515 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 GPR158Q5T848 1215 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 MARC1Q5VT66 337 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 TTC39BQ5VTQ0 682 aaPredicted RBP18.58■□□□□ 0.57
PHGDH-209ENST00000641074 LEKR1Q6ZMV7 388 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 HTR3DQ70Z44 454 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 FAM217AQ8IXS0 508 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 TEX26Q8N6G2 289 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 OR7D4Q8NG98 312 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 XPO6Q96QU8 1125 aaKnown RBP18.58■□□□□ 0.57
PHGDH-209ENST00000641074 TRIM56Q9BRZ2 755 aaKnown RBP18.58■□□□□ 0.57
PHGDH-209ENST00000641074 ACSS3Q9H6R3 686 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 LRRC40Q9H9A6 602 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 EURLQ9NYK6 297 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 LSM7Q9UK45 103 aaKnown RBP18.58■□□□□ 0.57
PHGDH-209ENST00000641074 TBC1D30Q9Y2I9 924 aa18.58■□□□□ 0.57
PHGDH-209ENST00000641074 AAR2Q9Y312 384 aaKnown RBP18.58■□□□□ 0.57
PHGDH-209ENST00000641074 CDH23Q9H251 3354 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 CHD5Q8TDI0 1954 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 POC1B-GALNT4F8VUJ3 575 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 XYLBO75191 536 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 CDH16O75309 829 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 SPAG6O75602 509 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 MT-CYBP00156 380 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-209ENST00000641074 HPDP32754 393 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-209ENST00000641074 CRADDP78560 199 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 EFTUD2Q15029 972 aaKnown RBP eCLIP18.58■□□□□ 0.563e-6■■■■□ 23.9
PHGDH-209ENST00000641074 TEAD2Q15562 447 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 SLC5A9Q2M3M2 681 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 UNC5AQ6ZN44 842 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 SETD3Q86TU7 594 aaPredicted RBP18.58■□□□□ 0.56
PHGDH-209ENST00000641074 NSMCE1Q8WV22 266 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 NKX2-4Q9H2Z4 354 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 NT5MQ9NPB1 228 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 CASS4Q9NQ75 786 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 LGALS13Q9UHV8 139 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 SH3BP1Q9Y3L3 701 aa18.58■□□□□ 0.56
PHGDH-209ENST00000641074 ILVBLA1L0T0 632 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 LEFTY2O00292 366 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 PSMD3O43242 534 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 TBL1XO60907 577 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 PIAS1O75925 651 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 ANXA9O76027 345 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 RHOCP08134 193 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 HOXD9P28356 352 aaPredicted RBP18.57■□□□□ 0.56
PHGDH-209ENST00000641074 NTHL1P78549 312 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 IL31Q6EBC2 164 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 CXorf57Q6NSI4 855 aaKnown RBP18.57■□□□□ 0.56
PHGDH-209ENST00000641074 CYP4X1Q8N118 509 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 ARNTL2Q8WYA1 636 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 TMA16Q96EY4 203 aaKnown RBP18.57■□□□□ 0.56
PHGDH-209ENST00000641074 STAMBPL1Q96FJ0 436 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 APOL2Q9BQE5 337 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 SPON2Q9BUD6 331 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 STMN4Q9H169 189 aaPredicted RBP18.57■□□□□ 0.56
PHGDH-209ENST00000641074 PDFQ9HBH1 243 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 ZDHHC7Q9NXF8 308 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 TBK1Q9UHD2 729 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 ARHGAP26Q9UNA1 814 aa18.57■□□□□ 0.56
PHGDH-209ENST00000641074 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-209ENST00000641074 DDX6P26196 483 aaKnown RBP eCLIP18.56■□□□□ 0.56
PHGDH-209ENST00000641074 GEMIN4P57678 1058 aaKnown RBP18.56■□□□□ 0.56
PHGDH-209ENST00000641074 TNK2Q07912 1038 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 LBRQ14739 615 aaKnown RBP18.56■□□□□ 0.56
PHGDH-209ENST00000641074 KLHL38Q2WGJ6 581 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 EMC10Q5UCC4 262 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 CASC4Q6P4E1 433 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 KDM7AQ6ZMT4 941 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 TDRPQ86YL5 185 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 BBS7Q8IWZ6 715 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 CMTM8Q8IZV2 173 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 DNAAF3Q8N9W5 541 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 HJURPQ8NCD3 748 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-209ENST00000641074 ZNF707Q96C28 371 aaPredicted RBP18.56■□□□□ 0.56
PHGDH-209ENST00000641074 MRRFQ96E11 262 aaKnown RBP18.56■□□□□ 0.56
PHGDH-209ENST00000641074 PRKD2Q9BZL6 878 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 SLC25A51Q9H1U9 297 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 SYBUQ9NX95 663 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 FETUBQ9UGM5 382 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 SLC24A2Q9UI40 661 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 CCL26Q9Y258 94 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 ZNF510Q9Y2H8 683 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 NOTCH4Q99466 2003 aa18.56■□□□□ 0.56
PHGDH-209ENST00000641074 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.55■□□□□ 0.56
PHGDH-209ENST00000641074 CCDC195A0A1B0GUA6 201 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms