RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 VCX3BQ9H321 246 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 XPR1Q9UBH6 696 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 OR12D3Q9UGF7 316 aa14.86□□□□□ -0.03
SCARB2-221ENST00000640341 FAM200BP0CF97 657 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 NELFEP18615 380 aaKnown RBP14.85□□□□□ -0.03
SCARB2-221ENST00000640341 TSPAN8P19075 237 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 TFEBP19484 476 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 CD68P34810 354 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-221ENST00000640341 DGKDQ16760 1214 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 FBXL19Q6PCT2 694 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 PAOXQ6QHF9 649 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 CRYBG2Q8N1P7 616 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 BHLHE22Q8NFJ8 381 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-221ENST00000640341 IFT43Q96FT9 208 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 SEMA6AQ9H2E6 1030 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 WDCPQ9H6R7 721 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 SF3B1O75533 1304 aaKnown RBP eCLIP14.85□□□□□ -0.034e-6■■■■■ 139.6
SCARB2-221ENST00000640341 MYBPHLA2RUH7 354 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 CXCL11O14625 94 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 STAU1O95793 577 aaKnown RBP14.85□□□□□ -0.03
SCARB2-221ENST00000640341 MOCS2O96007 188 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-221ENST00000640341 MMP3P08254 477 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 PMLP29590 882 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 CDK7P50613 346 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 CYLC2Q14093 348 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-221ENST00000640341 GK3PQ14409 553 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 AAGABQ6PD74 315 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 PDZD4Q76G19 769 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-221ENST00000640341 NPY6RQ99463 290 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 SIKE1Q9BRV8 207 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 CD4P01730 458 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 FGFR3P22607 806 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 ZBTB6Q15916 424 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 MAMDC4Q6UXC1 1216 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 ACAD11Q709F0 780 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 IFNLR1Q8IU57 520 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-221ENST00000640341 FSTL5Q8N475 847 aaPredicted RBP14.85□□□□□ -0.03
SCARB2-221ENST00000640341 KYQ8NBH2 561 aa14.85□□□□□ -0.03
SCARB2-221ENST00000640341 PEX1O43933 1283 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 CSPG5O95196 566 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 SNAI1O95863 264 aaPredicted RBP14.84□□□□□ -0.03
SCARB2-221ENST00000640341 RPL14P50914 215 aaKnown RBP14.84□□□□□ -0.03
SCARB2-221ENST00000640341 INSCQ1MX18 579 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 ZNF354CQ86Y25 554 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 NXNL1Q96CM4 212 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 TRAPPC9Q96Q05 1148 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 NDNQ99608 321 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 FAM96AQ9H5X1 160 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 IGSF9Q9P2J2 1179 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 PTPRFP10586 1907 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 PIRO00625 290 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 HDAC3O15379 428 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 TREHO43280 583 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 DAB1O75553 588 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 HDCP19113 662 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 SOX11P35716 441 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 GRIA2P42262 883 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 NRF1Q16656 503 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 NOMO2Q5JPE7 1267 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 KIAA0319Q5VV43 1072 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 PGM2L1Q6PCE3 622 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 BNC2Q6ZN30 1099 aaPredicted RBP14.84□□□□□ -0.03
SCARB2-221ENST00000640341 ZNF410Q86VK4 478 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 TTC16Q8NEE8 873 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 EXT2Q93063 718 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 ELMO2Q96JJ3 720 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 GORASP1Q9BQQ3 440 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 SPATA16Q9BXB7 569 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 STN1Q9H668 368 aaKnown RBP14.84□□□□□ -0.03
SCARB2-221ENST00000640341 SLC2A6Q9UGQ3 507 aa14.84□□□□□ -0.03
SCARB2-221ENST00000640341 C15orf38-AP3S2A0A0A6YYH1 394 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 DCLK1O15075 740 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 SMIM10L2AP0DMW4 78 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 SMIM10L2BP0DMW5 78 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 THRAP10827 490 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 MTTPP55157 894 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 SV2CQ496J9 727 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 SH2D4BQ5SQS7 431 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 PAQR9Q6ZVX9 377 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 FASTKD5Q7L8L6 764 aaKnown RBP14.83□□□□□ -0.03
SCARB2-221ENST00000640341 ARPINQ7Z6K5 226 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 JADE3Q92613 823 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 LPPQ93052 612 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 DCUN1D1Q96GG9 259 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 ADAMTS10Q9H324 1103 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 TMEM30AQ9NV96 361 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 RNF181Q9P0P0 153 aa14.83□□□□□ -0.03
SCARB2-221ENST00000640341 CASTOR2A6NHX0 329 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 TIMM44O43615 452 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 TOMM70O94826 608 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 LRIG2O94898 1065 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 FYNP06241 537 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 DARSP14868 501 aaKnown RBP14.83□□□□□ -0.04
SCARB2-221ENST00000640341 DPYSQ14117 519 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 C6orf52Q5T4I8 152 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 ESRP1Q6NXG1 681 aaKnown RBP14.83□□□□□ -0.04
SCARB2-221ENST00000640341 CYS1Q717R9 158 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 PQLC1Q8N2U9 271 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 PHF21BQ96EK2 531 aa14.83□□□□□ -0.04
SCARB2-221ENST00000640341 EIF2B3Q9NR50 452 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms