RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, human

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-222	ENST00000638959	IGKV6-21	A0A0C4DH24	114 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	PSMD14	O00487	310 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	SH2B2	O14492	632 aa	Predicted RBP	0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	TCERG1	O14776	1098 aa	Known RBP	0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	IL18RAP	O95256	599 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	MYZAP	P0CAP1	466 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	NPR1	P16066	1061 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	ZNF26	P17031	533 aa	Predicted RBP	0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	KLRC2	P26717	231 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	ACVR2A	P27037	513 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	TNFAIP2	Q03169	654 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	SEMA3B	Q13214	749 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	TNFAIP1	Q13829	316 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	SLC29A2	Q14542	456 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	ABCB5	Q2M3G0	1257 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	RNF212	Q495C1	297 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	IRAK1BP1	Q5VVH5	260 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	RNF219	Q5W0B1	726 aa	Predicted RBP	0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	ACSM6	Q6P461	480 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	TMEM64	Q6YI46	380 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	USP45	Q70EL2	814 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	CNTD1	Q8N815	330 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	SUN3	Q8TAQ9	357 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	ADAD1	Q96M93	576 aa	Known RBP	0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	ZNF583	Q96ND8	569 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	STK31	Q9BXU1	1019 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	DPH1	Q9BZG8	443 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	DHX36	Q9H2U1	1008 aa	Known RBP	0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	ACTR5	Q9H9F9	607 aa	Predicted RBP	0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	SMURF2	Q9HAU4	748 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	FAM118A	Q9NWS6	357 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	ZNF224	Q9NZL3	707 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	RASAL2	Q9UJF2	1139 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	MAN1B1	Q9UKM7	699 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	FBXO4	Q9UKT5	387 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	HPSE	Q9Y251	543 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	STXBP5L	Q9Y2K9	1186 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959	PAXBP1	Q9Y5B6	917 aa		0.81	□□□□□ -2.28
LMBR1-222	ENST00000638959		A0A0U1RQF3	1178 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959		A0A1W2PPI3	338 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	HMX3	A6NHT5	357 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	PYCARD-AS1	I3L0S3	204 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	DVL1	O14640	695 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	PI15	O43692	258 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	LINC00271	P0C7V0	271 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	ALAD	P13716	330 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	FMO4	P31512	558 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	DVL1P1	P54792	670 aa	Predicted RBP	0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	RAB1A	P62820	205 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	SLC20A2	Q08357	652 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	FGL2	Q14314	439 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	RFTN1	Q14699	578 aa	Predicted RBP	0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	PCBP2	Q15366	365 aa	Known RBP eCLIP	0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	ARL13A	Q5H913	290 aa	Predicted RBP	0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	MANEAL	Q5VSG8	457 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	FAM90A2P	Q658T7	463 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	ZNF790	Q6PG37	636 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	NEK10	Q6ZWH5	1172 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	KRT28	Q7Z3Y7	464 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	DSEL	Q8IZU8	1212 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	PRR18	Q8N4B5	295 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	LSM14A	Q8ND56	463 aa	Known RBP	0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	SRFBP1	Q8NEF9	429 aa	Known RBP	0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	PLBD2	Q8NHP8	589 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	CPT1B	Q92523	772 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	SELENOO	Q9BVL4	669 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	CACNG5	Q9UF02	275 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	SIX4	Q9UIU6	781 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	RARRES3	Q9UL19	164 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	FAF1	Q9UNN5	650 aa	Predicted RBP	0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	CGNL1	Q0VF96	1302 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959	LMTK3	Q96Q04	1460 aa		0.8	□□□□□ -2.28
LMBR1-222	ENST00000638959		A0A1W2PPL8	197 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	CAPN8	A6NHC0	703 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	TIMM23	O14925	209 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	CLDN14	O95500	239 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	KIT	P10721	976 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	UNG	P13051	313 aa	Predicted RBP	0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	GNB3	P16520	340 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	STAT1	P42224	750 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	PTGER3	P43115	390 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	PITX1	P78337	314 aa	Predicted RBP	0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	SHC2	P98077	582 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	ITGA9	Q13797	1035 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	XKR4	Q5GH76	650 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	SFMBT2	Q5VUG0	894 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	CATIP	Q7Z7H3	387 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	APLF	Q8IW19	511 aa	Predicted RBP	0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	ADPRHL1	Q8NDY3	354 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	KLHDC9	Q8NEP7	349 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	STT3B	Q8TCJ2	826 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	CHAC2	Q8WUX2	184 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	TMEM190	Q8WZ59	177 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	SYT11	Q9BT88	431 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	MVB12B	Q9H7P6	319 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	FGF22	Q9HCT0	170 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	SLC52A3	Q9NQ40	469 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	MID2	Q9UJV3	735 aa		0.79	□□□□□ -2.28
LMBR1-222	ENST00000638959	MRPS28	Q9Y2Q9	187 aa	Known RBP	0.79	□□□□□ -2.28

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