RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 TMA7Q9Y2S6 64 aaKnown RBP18.75■□□□□ 0.59
SCARB2-213ENST00000638680 ITSN1Q15811 1721 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 ATXN2Q99700 1313 aaKnown RBP18.75■□□□□ 0.59
SCARB2-213ENST00000638680 USP17L7P0C7H9 530 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 GRIK4Q16099 956 aa18.75■□□□□ 0.59
SCARB2-213ENST00000638680 DEPDC5O75140 1603 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 A0A1W2PPM1 405 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 SH3BGRLO75368 114 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 POMCP01189 267 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 GRK4P32298 578 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 LSM3P62310 102 aaKnown RBP18.74■□□□□ 0.59
SCARB2-213ENST00000638680 FMO1Q01740 532 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 TNK2Q07912 1038 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 PCID2Q5JVF3 399 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 OVOS1Q6IE37 1185 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 SYT12Q8IV01 421 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 PHACTR4Q8IZ21 702 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 KLHL31Q9H511 634 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 POLR1BQ9H9Y6 1135 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 KCNQ5Q9NR82 932 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 ADAM28Q9UKQ2 775 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 FAM50BQ9Y247 325 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 CLTCQ00610 1675 aaKnown RBP18.74■□□□□ 0.59
SCARB2-213ENST00000638680 IL6P05231 212 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 LRRC38Q5VT99 294 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 NEPROQ6NW34 567 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 LENG1Q96BZ8 264 aaPredicted RBP18.74■□□□□ 0.59
SCARB2-213ENST00000638680 SLC4A5Q9BY07 1137 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 MROH8Q9H579 483 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 CATSPERZQ9NTU4 200 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 AHSPQ9NZD4 102 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 CDH9Q9ULB4 789 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 EPN2O95208 641 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 CCDC166P0CW27 439 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 TSHRP16473 764 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 PAICSP22234 425 aaKnown RBP18.74■□□□□ 0.59
SCARB2-213ENST00000638680 DNAJB2P25686 324 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 PHKG1Q16816 387 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 INO80DQ53TQ3 878 aaPredicted RBP18.74■□□□□ 0.59
SCARB2-213ENST00000638680 RP9Q8TA86 221 aaKnown RBP18.74■□□□□ 0.59
SCARB2-213ENST00000638680 DNAJB14Q8TBM8 379 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 TMEM169Q96HH4 297 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 OPTCQ9UBM4 332 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 H3BRB1 525 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 LYPLA1O75608 230 aaPredicted RBP18.74■□□□□ 0.59
SCARB2-213ENST00000638680 VCLP18206 1134 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 ADSSP30520 456 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 FAM183BPQ6ZVS7 135 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.74■□□□□ 0.59
SCARB2-213ENST00000638680 DNAJC19Q96DA6 116 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 TUT1Q9H6E5 874 aaKnown RBP18.74■□□□□ 0.59
SCARB2-213ENST00000638680 BTBD3Q9Y2F9 522 aa18.74■□□□□ 0.59
SCARB2-213ENST00000638680 A8MUI8 341 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 WFS1O76024 890 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 EPS8Q12929 822 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 ZNF280DQ6N043 979 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 ZCCHC8Q6NZY4 707 aaKnown RBP18.73■□□□□ 0.59
SCARB2-213ENST00000638680 SLC27A1Q6PCB7 646 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 MECRQ9BV79 373 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 ABCA9Q8IUA7 1624 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 PEX11AO75192 247 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 CYP7B1O75881 506 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 HPGDP15428 266 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 ZNF37AP17032 561 aaPredicted RBP18.73■□□□□ 0.59
SCARB2-213ENST00000638680 GPR15P49685 360 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 TMEM132BQ14DG7 1078 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 SERPINB11Q96P15 392 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 GORASP1Q9BQQ3 440 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 EPB41L1Q9H4G0 881 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 TRMT11Q7Z4G4 463 aaKnown RBP18.73■□□□□ 0.59
SCARB2-213ENST00000638680 SPATA20Q8TB22 786 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 RCN3Q96D15 328 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 KCNMB3Q9NPA1 279 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 AP4B1Q9Y6B7 739 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 TBKBP1A7MCY6 615 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 COX7A2P14406 83 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 DDR1Q08345 913 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 GPR107Q5VW38 600 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 TMEM159Q96B96 161 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 OMDQ99983 421 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 FHDC1Q9C0D6 1143 aaPredicted RBP18.73■□□□□ 0.59
SCARB2-213ENST00000638680 OSGEPL1Q9H4B0 414 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 CASZ1Q86V15 1759 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 TNFRSF21O75509 655 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 CYP3A4P08684 503 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 ZNF143P52747 638 aaPredicted RBP18.73■□□□□ 0.59
SCARB2-213ENST00000638680 FAM187BQ17R55 369 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 SWT1Q5T5J6 900 aaKnown RBP18.73■□□□□ 0.59
SCARB2-213ENST00000638680 MACC1Q6ZN28 852 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 AMIGO2Q86SJ2 522 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 PTGR2Q8N8N7 351 aaPredicted RBP18.73■□□□□ 0.59
SCARB2-213ENST00000638680 LRRN4Q8WUT4 740 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 HAS1Q92839 578 aa18.73■□□□□ 0.59
SCARB2-213ENST00000638680 PTCD3Q96EY7 689 aaKnown RBP18.73■□□□□ 0.59
SCARB2-213ENST00000638680 INPP4AQ96PE3 977 aaPredicted RBP18.73■□□□□ 0.59
SCARB2-213ENST00000638680 EDF1O60869 148 aaKnown RBP18.72■□□□□ 0.59
SCARB2-213ENST00000638680 HPCAL1P37235 193 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 STX4Q12846 297 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 TAB1Q15750 504 aa18.72■□□□□ 0.59
SCARB2-213ENST00000638680 TTC23Q5W5X9 447 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms