RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 B3GALT6Q96L58 329 aa21.89■■□□□ 1.09
CLN6-224ENST00000638076 C1orf74Q96LT6 269 aa21.89■■□□□ 1.09
CLN6-224ENST00000638076 TSEN34Q9BSV6 310 aaKnown RBP21.89■■□□□ 1.09
CLN6-224ENST00000638076 FTHL17Q9BXU8 183 aa21.89■■□□□ 1.09
CLN6-224ENST00000638076 RBM22Q9NW64 420 aaKnown RBP eCLIP21.89■■□□□ 1.09
CLN6-224ENST00000638076 TMEM161AQ9NX61 479 aa21.89■■□□□ 1.09
CLN6-224ENST00000638076 COPG2Q9UBF2 871 aa21.89■■□□□ 1.09
CLN6-224ENST00000638076 SLC1A6P48664 564 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 CSE1LP55060 971 aaKnown RBP21.88■■□□□ 1.09
CLN6-224ENST00000638076 CDK18Q07002 472 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 SWT1Q5T5J6 900 aaKnown RBP21.88■■□□□ 1.09
CLN6-224ENST00000638076 FAM171A1Q5VUB5 890 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 MSANTD2Q6P1R3 559 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 FICDQ9BVA6 458 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 ARMCX1Q9P291 453 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 L3MBTL1Q9Y468 752 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 TIMM44O43615 452 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 CCDC22O60826 627 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 TBX4P57082 545 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 POU6F1Q14863 301 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 KRT72Q14CN4 511 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 DLG2Q15700 870 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 PCID2Q5JVF3 399 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 LHX8Q68G74 356 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 PDPK2PQ6A1A2 396 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.88■■□□□ 1.09
CLN6-224ENST00000638076 MCMBPQ9BTE3 642 aa21.88■■□□□ 1.09
CLN6-224ENST00000638076 A0A096LPK6 155 aa21.87■■□□□ 1.09
CLN6-224ENST00000638076 NEBLO76041 1014 aa21.87■■□□□ 1.09
CLN6-224ENST00000638076 CALB2P22676 271 aa21.87■■□□□ 1.09
CLN6-224ENST00000638076 GEMP55040 296 aa21.87■■□□□ 1.09
CLN6-224ENST00000638076 ARPP19P56211 112 aa21.87■■□□□ 1.09
CLN6-224ENST00000638076 EFEMP1Q12805 493 aa21.87■■□□□ 1.09
CLN6-224ENST00000638076 CCDC153Q494R4 210 aa21.87■■□□□ 1.09
CLN6-224ENST00000638076 DENND5AQ6IQ26 1287 aa21.87■■□□□ 1.09
CLN6-224ENST00000638076 LRRC8DQ7L1W4 858 aa21.87■■□□□ 1.09
CLN6-224ENST00000638076 ABI1Q8IZP0 508 aa21.87■■□□□ 1.09
CLN6-224ENST00000638076 ARHGAP18Q8N392 663 aa21.87■■□□□ 1.09
CLN6-224ENST00000638076 VPS39Q96JC1 886 aa21.87■■□□□ 1.09
CLN6-224ENST00000638076 MIPEPQ99797 713 aa21.87■■□□□ 1.09
CLN6-224ENST00000638076 DNAJC16Q9Y2G8 782 aa21.87■■□□□ 1.09
CLN6-224ENST00000638076 SOAT2O75908 522 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 SERPINE1P05121 402 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 MPOP05164 745 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 SLC2A3P11169 496 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 PKN3Q6P5Z2 889 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 FAM13CQ8NE31 585 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 ACVR1CQ8NER5 493 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 PIWIL2Q8TC59 973 aaKnown RBP21.86■■□□□ 1.09
CLN6-224ENST00000638076 GPR62Q9BZJ7 368 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 TLE6Q9H808 572 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 PPARGC1AQ9UBK2 798 aaKnown RBP21.86■■□□□ 1.09
CLN6-224ENST00000638076 IPO11Q9UI26 975 aaKnown RBP21.86■■□□□ 1.09
CLN6-224ENST00000638076 NYNRINQ9P2P1 1898 aaKnown RBP21.86■■□□□ 1.09
CLN6-224ENST00000638076 WASH4PA8MWX3 477 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 PMPCBO75439 489 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 CCND1P24385 295 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 MAGEA11P43364 429 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 IRF9Q00978 393 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 FAM91A1Q658Y4 838 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 TFAP2DQ7Z6R9 452 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 TNS4Q8IZW8 715 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 BTBD10Q9BSF8 475 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 FSD1LQ9BXM9 530 aa21.86■■□□□ 1.09
CLN6-224ENST00000638076 NOL6Q9H6R4 1146 aaKnown RBP21.86■■□□□ 1.09
CLN6-224ENST00000638076 TRPA1O75762 1119 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 TBX18O95935 607 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 C2P06681 752 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 ESRRAP11474 423 aaPredicted RBP21.85■■□□□ 1.09
CLN6-224ENST00000638076 CPA3P15088 417 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 ADRA1AP35348 466 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 GATMP50440 423 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 MRPL58Q14197 206 aaKnown RBP21.85■■□□□ 1.09
CLN6-224ENST00000638076 MS4A13Q5J8X5 152 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 ZNF280DQ6N043 979 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 LRRC49Q8IUZ0 686 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 WDR75Q8IWA0 830 aaKnown RBP21.85■■□□□ 1.09
CLN6-224ENST00000638076 EBF4Q9BQW3 602 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 ENTPD7Q9NQZ7 604 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 ARVCFO00192 962 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 INHAP05111 366 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 RALBP11234 206 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 GRK2P25098 689 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 WLSQ5T9L3 541 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 KDELC2Q7Z4H8 507 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 CLEC14AQ86T13 490 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 ZNF683Q8IZ20 524 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 PXYLP1Q8TE99 480 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 FBXO32Q969P5 355 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 RILPQ96NA2 401 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 NSMCE4AQ9NXX6 385 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 IL37Q9NZH6 218 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 SLC39A10Q9ULF5 831 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 SLC27A5Q9Y2P5 690 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 PCDHB7Q9Y5E2 793 aa21.85■■□□□ 1.09
CLN6-224ENST00000638076 VWA8A3KMH1 1905 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 ENPP3O14638 875 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 NBNO60934 754 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 WFS1O76024 890 aa21.84■■□□□ 1.09
CLN6-224ENST00000638076 COL6A1P12109 1028 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms