RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 CACNG3O60359 315 aa12□□□□□ -0.49
CLN6-223ENST00000637823 APRTP07741 180 aa12□□□□□ -0.49
CLN6-223ENST00000637823 GOLGA6DP0CG33 693 aa12□□□□□ -0.49
CLN6-223ENST00000637823 PSMB4P28070 264 aa12□□□□□ -0.49
CLN6-223ENST00000637823 HOXD9P28356 352 aaPredicted RBP12□□□□□ -0.49
CLN6-223ENST00000637823 CD68P34810 354 aaPredicted RBP12□□□□□ -0.49
CLN6-223ENST00000637823 LMAN1P49257 510 aa12□□□□□ -0.49
CLN6-223ENST00000637823 ARL4CP56559 192 aa12□□□□□ -0.49
CLN6-223ENST00000637823 SLC12A1Q13621 1099 aa12□□□□□ -0.49
CLN6-223ENST00000637823 CDH18Q13634 790 aa12□□□□□ -0.49
CLN6-223ENST00000637823 COL19A1Q14993 1142 aa12□□□□□ -0.49
CLN6-223ENST00000637823 FSCBQ5H9T9 825 aa12□□□□□ -0.49
CLN6-223ENST00000637823 FAM182AQ5T1J6 154 aa12□□□□□ -0.49
CLN6-223ENST00000637823 FAXCQ5TGI0 409 aa12□□□□□ -0.49
CLN6-223ENST00000637823 FYB2Q5VWT5 728 aa12□□□□□ -0.49
CLN6-223ENST00000637823 TRMT10CQ7L0Y3 403 aaKnown RBP12□□□□□ -0.49
CLN6-223ENST00000637823 GET4Q7L5D6 327 aaPredicted RBP12□□□□□ -0.49
CLN6-223ENST00000637823 CCDC25Q86WR0 208 aa12□□□□□ -0.49
CLN6-223ENST00000637823 TMEM25Q86YD3 366 aa12□□□□□ -0.49
CLN6-223ENST00000637823 RELL1Q8IUW5 271 aa12□□□□□ -0.49
CLN6-223ENST00000637823 MFN1Q8IWA4 741 aa12□□□□□ -0.49
CLN6-223ENST00000637823 ZNF557Q8N988 423 aaPredicted RBP12□□□□□ -0.49
CLN6-223ENST00000637823 OR7D4Q8NG98 312 aa12□□□□□ -0.49
CLN6-223ENST00000637823 OR52K2Q8NGK3 314 aa12□□□□□ -0.49
CLN6-223ENST00000637823 USP33Q8TEY7 942 aa12□□□□□ -0.49
CLN6-223ENST00000637823 FCRL5Q96RD9 977 aa12□□□□□ -0.49
CLN6-223ENST00000637823 RBM15Q96T37 977 aaKnown RBP eCLIP12□□□□□ -0.492e-7■■■■□ 25.8
CLN6-223ENST00000637823 MUC3BQ9H195 1237 aa12□□□□□ -0.49
CLN6-223ENST00000637823 PDFQ9HBH1 243 aa12□□□□□ -0.49
CLN6-223ENST00000637823 ATP13A1Q9HD20 1204 aa12□□□□□ -0.49
CLN6-223ENST00000637823 SPHK2Q9NRA0 654 aa12□□□□□ -0.49
CLN6-223ENST00000637823 HAUS2Q9NVX0 235 aa12□□□□□ -0.49
CLN6-223ENST00000637823 CLDND1Q9NY35 253 aa12□□□□□ -0.49
CLN6-223ENST00000637823 GOLGA6AQ9NYA3 693 aa12□□□□□ -0.49
CLN6-223ENST00000637823 KIAA1522Q9P206 1035 aaPredicted RBP12□□□□□ -0.49
CLN6-223ENST00000637823 CDH7Q9ULB5 785 aa12□□□□□ -0.49
CLN6-223ENST00000637823 ATP8A1Q9Y2Q0 1164 aa12□□□□□ -0.49
CLN6-223ENST00000637823 TRIOBPQ9H2D6 2365 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.99□□□□□ -0.49
CLN6-223ENST00000637823 ALOX15BO15296 676 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 TBX10O75333 385 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 ANXA9O76027 345 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 TMEM63AO94886 807 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 PENKP01210 267 aaPredicted RBP11.99□□□□□ -0.49
CLN6-223ENST00000637823 MLNP12872 115 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 NFKB1P19838 968 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 IGFBP4P22692 258 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 MZF1P28698 734 aaPredicted RBP11.99□□□□□ -0.49
CLN6-223ENST00000637823 LTBRP36941 435 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 HSD17B3P37058 310 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 VIPR2P41587 438 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 MMP13P45452 471 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 PLK1P53350 603 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 SLC10A7Q0GE19 358 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 ADGRE1Q14246 886 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 RFTN1Q14699 578 aaPredicted RBP11.99□□□□□ -0.49
CLN6-223ENST00000637823 LBRQ14739 615 aaKnown RBP11.99□□□□□ -0.49
CLN6-223ENST00000637823 HIF1AQ16665 826 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 CFAP58Q5T655 872 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 ALS2CLQ60I27 953 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 CENPUQ71F23 418 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 KLHDC8BQ8IXV7 354 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 PDIK1LQ8N165 341 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 BBS5Q8N3I7 341 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 TSEN2Q8NCE0 465 aaKnown RBP11.99□□□□□ -0.49
CLN6-223ENST00000637823 BPIFB1Q8TDL5 484 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 OSCP1Q8WVF1 389 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 UBLCP1Q8WVY7 318 aaPredicted RBP11.99□□□□□ -0.49
CLN6-223ENST00000637823 PABPC5Q96DU9 382 aaKnown RBP11.99□□□□□ -0.49
CLN6-223ENST00000637823 RSPRY1Q96DX4 576 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 ALG14Q96F25 216 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 MSLNLQ96KJ4 702 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 PWWP2AQ96N64 755 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 LRRC3BQ96PB8 259 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 SLC2A11Q9BYW1 496 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 SLC25A51Q9H1U9 297 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 PABPC3Q9H361 631 aaKnown RBP11.99□□□□□ -0.49
CLN6-223ENST00000637823 XAB2Q9HCS7 855 aaKnown RBP11.99□□□□□ -0.49
CLN6-223ENST00000637823 THG1LQ9NWX6 298 aaKnown RBP11.99□□□□□ -0.49
CLN6-223ENST00000637823 DUS2Q9NX74 493 aaKnown RBP11.99□□□□□ -0.49
CLN6-223ENST00000637823 MARK1Q9P0L2 795 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 UBA2Q9UBT2 640 aaPredicted RBP11.99□□□□□ -0.49
CLN6-223ENST00000637823 AAR2Q9Y312 384 aaKnown RBP11.99□□□□□ -0.49
CLN6-223ENST00000637823 OR51B4Q9Y5P0 310 aa11.99□□□□□ -0.49
CLN6-223ENST00000637823 CXorf51AA0A1B0GTR3 108 aa11.98□□□□□ -0.49
CLN6-223ENST00000637823 HEPACAM2A8MVW5 462 aa11.98□□□□□ -0.49
CLN6-223ENST00000637823 E7ESA3 106 aa11.98□□□□□ -0.49
CLN6-223ENST00000637823 GOLGA8MH3BSY2 632 aa11.98□□□□□ -0.49
CLN6-223ENST00000637823 CBX4O00257 560 aa11.98□□□□□ -0.49
CLN6-223ENST00000637823 SUN1O94901 812 aa11.98□□□□□ -0.49
CLN6-223ENST00000637823 AP2A1O95782 977 aa11.98□□□□□ -0.49
CLN6-223ENST00000637823 HLA-DQB2P05538 268 aa11.98□□□□□ -0.49
CLN6-223ENST00000637823 MAGEA4P43358 317 aa11.98□□□□□ -0.49
CLN6-223ENST00000637823 GEMP55040 296 aa11.98□□□□□ -0.49
CLN6-223ENST00000637823 GEMIN4P57678 1058 aaKnown RBP11.98□□□□□ -0.49
CLN6-223ENST00000637823 GAD2Q05329 585 aa11.98□□□□□ -0.49
CLN6-223ENST00000637823 DLX2Q07687 328 aaPredicted RBP11.98□□□□□ -0.49
CLN6-223ENST00000637823 LY6G5CQ5SRR4 150 aa11.98□□□□□ -0.49
CLN6-223ENST00000637823 FNBP1LQ5T0N5 605 aa11.98□□□□□ -0.49
CLN6-223ENST00000637823 KCTD11Q693B1 232 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms