RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 APLFQ8IW19 511 aaPredicted RBP11.74□□□□□ -0.53
CLN6-217ENST00000636964 APBB2Q92870 758 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 FCRL2Q96LA5 508 aaPredicted RBP11.74□□□□□ -0.53
CLN6-217ENST00000636964 TRAPPC9Q96Q05 1148 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 KLF6Q99612 283 aaPredicted RBP11.74□□□□□ -0.53
CLN6-217ENST00000636964 CCDC68Q9H2F9 335 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 MPP6Q9NZW5 540 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 KLHL14Q9P2G3 628 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 KLHL8Q9P2G9 620 aaPredicted RBP11.74□□□□□ -0.53
CLN6-217ENST00000636964 ZC3H7BQ9UGR2 993 aaKnown RBP11.74□□□□□ -0.53
CLN6-217ENST00000636964 MAGED2Q9UNF1 606 aaPredicted RBP11.74□□□□□ -0.53
CLN6-217ENST00000636964 CDY1Q9Y6F8 540 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 MTMR11A4FU01 709 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 GOLGA8RI6L899 631 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 DFFAO00273 331 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 FAM155BO75949 473 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 HMBSP08397 361 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 CCR1P32246 355 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 SESN2P58004 480 aaPredicted RBP11.74□□□□□ -0.53
CLN6-217ENST00000636964 EFEMP1Q12805 493 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 ARHGAP36Q6ZRI8 547 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 MIB1Q86YT6 1006 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 SCML4Q8N228 414 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 DCLK2Q8N568 766 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 SCG3Q8WXD2 468 aaKnown RBP11.74□□□□□ -0.53
CLN6-217ENST00000636964 FUBP3Q96I24 572 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLN6-217ENST00000636964 ACSS3Q9H6R3 686 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 TXLNGQ9NUQ3 528 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 NDFIP2Q9NV92 336 aa11.74□□□□□ -0.53
CLN6-217ENST00000636964 USP12O75317 370 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 VNN2O95498 520 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 GSTT1P30711 240 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 ALDH7A1P49419 539 aaKnown RBP11.73□□□□□ -0.53
CLN6-217ENST00000636964 GLUD2P49448 558 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 MUM1Q2TAK8 710 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 PDZD4Q76G19 769 aaPredicted RBP11.73□□□□□ -0.53
CLN6-217ENST00000636964 TRABD2AQ86V40 505 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 MON1AQ86VX9 555 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 CTAGE3PQ8IX95 158 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 FBXO32Q969P5 355 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 NDNQ99608 321 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 SMOC2Q9H3U7 446 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 TRABDQ9H4I3 376 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 PREBQ9HCU5 417 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 KIAA0100Q14667 2235 aaKnown RBP11.73□□□□□ -0.53
CLN6-217ENST00000636964 SHROOM3Q8TF72 1996 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 KRT36O76013 467 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 MSL3P1P0C860 447 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 PTPN3P26045 913 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 HCAR3P49019 387 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 TAF10Q12962 218 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 EIF4EBP2Q13542 120 aaPredicted RBP11.73□□□□□ -0.53
CLN6-217ENST00000636964 SEMA5AQ13591 1074 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 CNPY1Q3B7I2 92 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 ZCCHC8Q6NZY4 707 aaKnown RBP11.73□□□□□ -0.53
CLN6-217ENST00000636964 CASC4Q6P4E1 433 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 ANKRD33Q7Z3H0 272 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 C8orf48Q96LL4 319 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 MAGEB18Q96M61 343 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 TTPALQ9BTX7 342 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 ARHGEF38Q9NXL2 777 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 UBP1Q9NZI7 540 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 C6orf203Q9P0P8 240 aaPredicted RBP11.73□□□□□ -0.53
CLN6-217ENST00000636964 PSMC3IPQ9P2W1 217 aaPredicted RBP11.73□□□□□ -0.53
CLN6-217ENST00000636964 SCML2Q9UQR0 700 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 ZBTB24O43167 697 aaPredicted RBP11.73□□□□□ -0.53
CLN6-217ENST00000636964 YWHAQP27348 245 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 SERPINB4P48594 390 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 CTC1Q2NKJ3 1217 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 WASHC2DQ5SRD0 308 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 SPOUT1Q5T280 376 aaKnown RBP11.73□□□□□ -0.53
CLN6-217ENST00000636964 RASIP1Q5U651 963 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 SNX30Q5VWJ9 437 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 INPP5DQ92835 1189 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 PTPRN2Q92932 1015 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 DTNBP1Q96EV8 351 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 SIGLEC10Q96LC7 697 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 CEP295NLQ96MC4 621 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 TLE6Q9H808 572 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 PLAC1Q9HBJ0 212 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 TMEM39AQ9NV64 488 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 LRCH1Q9Y2L9 728 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 TTLL3Q9Y4R7 772 aa11.73□□□□□ -0.53
CLN6-217ENST00000636964 MYO16Q9Y6X6 1858 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 OR6C75A6NL08 312 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 CXorf49A8MYA2 514 aaPredicted RBP11.72□□□□□ -0.53
CLN6-217ENST00000636964 CXCL10P02778 98 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 NEK3P51956 506 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 ZBTB17Q13105 803 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 ACSBG2Q5FVE4 666 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 TRMT10BQ6PF06 316 aaKnown RBP11.72□□□□□ -0.53
CLN6-217ENST00000636964 UNC5BQ8IZJ1 945 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 PPM1NQ8N819 430 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 SREK1Q8WXA9 508 aaKnown RBP11.72□□□□□ -0.53
CLN6-217ENST00000636964 NCSTNQ92542 709 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 SPATA17Q96L03 361 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 FERMT1Q9BQL6 677 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 TRIM62Q9BVG3 475 aa11.72□□□□□ -0.53
CLN6-217ENST00000636964 MRPL9Q9BYD2 267 aaKnown RBP11.72□□□□□ -0.53
CLN6-217ENST00000636964 FBXO44Q9H4M3 255 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms