RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 CLCA1A8K7I4 914 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 M0R3H8 397 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 NPC1O15118 1278 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 FFAR2O15552 330 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 DNPH1O43598 174 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 ASNA1O43681 348 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 USP12O75317 370 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 PEX14O75381 377 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 SKAP2O75563 359 aaPredicted RBP1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 KRT38O76015 456 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 TNFRSF6BO95407 300 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 NFATC1O95644 943 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 ARP10275 920 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 AKR1A1P14550 325 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 KLRK1P26718 216 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 MST1P26927 711 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 GABRB3P28472 473 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 DUSP1P28562 367 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 HOXA7P31268 230 aaPredicted RBP1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 SLC8A1P32418 973 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 GRK5P34947 590 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 PPM1AP35813 382 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 STAT6P42226 847 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 HSPA7P48741 367 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 PCYT1AP49585 367 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 AGTR2P50052 363 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 PDLIM4P50479 330 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 GPC5P78333 572 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 TNFAIP2Q03169 654 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 ICA1Q05084 483 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 GAD2Q05329 585 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 TROAPQ12815 778 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 COASYQ13057 564 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 BIRC2Q13490 618 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 ATP1A4Q13733 1029 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 CLCA4Q14CN2 919 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 ACOX1Q15067 660 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 MAPKAPK3Q16644 382 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 MPEG1Q2M385 716 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 SLC5A9Q2M3M2 681 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 SMTNL2Q2TAL5 461 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 BTBD16Q32M84 506 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 CCDC38Q502W7 563 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 LCE3AQ5TA76 89 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 ATPAF1Q5TC12 328 aaPredicted RBP1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 ANKRD45Q5TZF3 282 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 ARL6IP4Q66PJ3 421 aaKnown RBP1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 ABLIM2Q6H8Q1 611 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 WDR93Q6P2C0 686 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 TLDC1Q6P9B6 456 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 LIN28BQ6ZN17 250 aaKnown RBP eCLIP1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 KIAA0408Q6ZU52 694 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 RRAGAQ7L523 313 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 TFAP2DQ7Z6R9 452 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 NRSN1Q8IZ57 195 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 RNF152Q8N8N0 203 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 SRFBP1Q8NEF9 429 aaKnown RBP1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 DEPTORQ8TB45 409 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 SLC22A17Q8WUG5 538 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 STYXQ8WUJ0 223 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 POF1BQ8WVV4 589 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 CCT6BQ92526 530 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 TAF15Q92804 592 aaKnown RBP eCLIP1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 GOLGA1Q92805 767 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 CELF1Q92879 486 aaKnown RBP1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 GJA10Q969M2 543 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 EME1Q96AY2 570 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 C3orf49Q96BT1 292 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 C18orf8Q96DM3 657 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 EDC3Q96F86 508 aaKnown RBP1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 SGCZQ96LD1 299 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 GPR78Q96P69 363 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 NODALQ96S42 347 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 CRB3Q9BUF7 120 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 HTATIP2Q9BUP3 242 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 SELENOOQ9BVL4 669 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 ELOVL1Q9BW60 279 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 TTLL2Q9BWV7 592 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 OSBPL5Q9H0X9 879 aaPredicted RBP1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 CDCP1Q9H5V8 836 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 ELAC1Q9H777 363 aaKnown RBP1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 SEPSECSQ9HD40 501 aaKnown RBP1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 OBP2BQ9NPH6 170 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 PLCB1Q9NQ66 1216 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 TRIM36Q9NQ86 728 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 TCF7L2Q9NQB0 619 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 CHST12Q9NRB3 414 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 PAPOLBQ9NRJ5 636 aaKnown RBP1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 VPS45Q9NRW7 570 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 HELLSQ9NRZ9 838 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 THSD1Q9NS62 852 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 TM7SF3Q9NS93 570 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 ABHD10Q9NUJ1 306 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 MTPAPQ9NVV4 582 aaKnown RBP eCLIP1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 HIF1ANQ9NWT6 349 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 WNT16Q9UBV4 365 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 KCNG2Q9UJ96 466 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 SLC25A13Q9UJS0 675 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 BAG5Q9UL15 447 aa1.24□□□□□ -2.21
SMARCB1-209ENST00000635578 TRPC5Q9UL62 973 aaPredicted RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms