RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543	CRYL1	Q9Y2S2	319 aa		13.52	□□□□□ -0.24
NRXN1-233	ENST00000630543	MTMR11	A4FU01	709 aa		13.52	□□□□□ -0.24
NRXN1-233	ENST00000630543	CORO1A	P31146	461 aa	Known RBP	13.52	□□□□□ -0.24
NRXN1-233	ENST00000630543	SERPINB8	P50452	374 aa		13.52	□□□□□ -0.24
NRXN1-233	ENST00000630543	ITGA9	Q13797	1035 aa		13.52	□□□□□ -0.24
NRXN1-233	ENST00000630543	GALNT3	Q14435	633 aa		13.52	□□□□□ -0.24
NRXN1-233	ENST00000630543	NLRP9	Q7RTR0	991 aa		13.52	□□□□□ -0.24
NRXN1-233	ENST00000630543	NECAB2	Q7Z6G3	386 aa		13.52	□□□□□ -0.24
NRXN1-233	ENST00000630543	CXorf38	Q8TB03	319 aa		13.52	□□□□□ -0.24
NRXN1-233	ENST00000630543	KCNN1	Q92952	543 aa		13.52	□□□□□ -0.24
NRXN1-233	ENST00000630543	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.52	□□□□□ -0.24
NRXN1-233	ENST00000630543	IL22	Q9GZX6	179 aa		13.52	□□□□□ -0.24
NRXN1-233	ENST00000630543	ACSS2	Q9NR19	701 aa		13.52	□□□□□ -0.24
NRXN1-233	ENST00000630543	AFF4	Q9UHB7	1163 aa	Known RBP	13.52	□□□□□ -0.24
NRXN1-233	ENST00000630543	CXorf49	A8MYA2	514 aa	Predicted RBP	13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	TIMM44	O43615	452 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	GFAP	P14136	432 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	CSF2RA	P15509	400 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	DSC2	Q02487	901 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	HABP4	Q5JVS0	413 aa	Known RBP	13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	RASIP1	Q5U651	963 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	LINGO4	Q6UY18	593 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	C14orf80	Q86SX3	495 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	DDX53	Q86TM3	631 aa	Known RBP	13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	ITIH5	Q86UX2	942 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	SLC44A1	Q8WWI5	657 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	NTAN1	Q96AB6	310 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	ANGPTL3	Q9Y5C1	460 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	CLUH	O75153	1309 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	TM9SF1	O15321	606 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	TBL1X	O60907	577 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	STMN1	P16949	149 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	NNMT	P40261	264 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	RPS24	P62847	133 aa	Known RBP	13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	KCNJ11	Q14654	390 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	LRRC8B	Q6P9F7	803 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	TTC1	Q99614	292 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	HS3ST4	Q9Y661	456 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	SLC30A1	Q9Y6M5	507 aa		13.52	□□□□□ -0.25
NRXN1-233	ENST00000630543	NBN	O60934	754 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	GJA1	P17302	382 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	TPSB2	P20231	275 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	CXCR3	P49682	368 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	USP46	P62068	366 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	TPSAB1	Q15661	275 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	MMEL1	Q495T6	779 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	COLGALT2	Q8IYK4	626 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	CALML6	Q8TD86	181 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	NDN	Q99608	321 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	POLR1E	Q9GZS1	481 aa	Known RBP	13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	SLC8A2	Q9UPR5	921 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	IL4R	P24394	825 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	ACTN3	Q08043	901 aa	Predicted RBP	13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	ZBTB17	Q13105	803 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	SNCB	Q16143	134 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	AP1AR	Q63HQ0	302 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	MTDH	Q86UE4	582 aa	Known RBP	13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	HERC6	Q8IVU3	1022 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	MFN1	Q8IWA4	741 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	TNS4	Q8IZW8	715 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	N4BP2L2	Q92802	583 aa	Predicted RBP	13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	CHRM3	P20309	590 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	TACR2	P21452	398 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	TPD52	P55327	224 aa	Predicted RBP	13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	MUM1	Q2TAK8	710 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	PPP1R2P1	Q96PQ5	205 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	SLC2A13	Q96QE2	648 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	TMEM109	Q9BVC6	243 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	APOL5	Q9BWW9	433 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	CNTN5	O94779	1100 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	ITGA2B	P08514	1039 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	CLTB	P09497	229 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	FAM163B	P0C2L3	166 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	SYN1	P17600	705 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	SERPINH1	P50454	418 aa	Known RBP	13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	CORO7	P57737	925 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	PPM1J	Q5JR12	505 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	PACS1	Q6VY07	963 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	SERAC1	Q96JX3	654 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	WWP1	Q9H0M0	922 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	PRDM16	Q9HAZ2	1276 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	HAO1	Q9UJM8	370 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	DNAJC16	Q9Y2G8	782 aa		13.51	□□□□□ -0.25
NRXN1-233	ENST00000630543	LOC100653049	A0A140TA62	436 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	MAGEB16	A2A368	324 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	TLL1	O43897	1013 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	KRT34	O76011	436 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	RHOBTB1	O94844	696 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	CPA3	P15088	417 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	PLK1	P53350	603 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	AQP5	P55064	265 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	PPM1L	Q5SGD2	360 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	GBA3	Q9H227	469 aa		13.5	□□□□□ -0.25
NRXN1-233	ENST00000630543	CERS4	Q9HA82	394 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms