RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 DNASE2BQ8WZ79 361 aa20.49■□□□□ 0.87
R3HCC1-210ENST00000625275 NTAN1Q96AB6 310 aa20.49■□□□□ 0.87
R3HCC1-210ENST00000625275 TRIM44Q96DX7 344 aaPredicted RBP20.49■□□□□ 0.87
R3HCC1-210ENST00000625275 NCAPGQ9BPX3 1015 aa20.49■□□□□ 0.87
R3HCC1-210ENST00000625275 SLC32A1Q9H598 525 aa20.49■□□□□ 0.87
R3HCC1-210ENST00000625275 ALG6Q9Y672 507 aa20.49■□□□□ 0.87
R3HCC1-210ENST00000625275 DOCK4Q8N1I0 1966 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 UPK3BL1B0FP48 263 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 UPK3BL2E5RIL1 263 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 PRPSAP2O60256 369 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 OPHN1O60890 802 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 PAGE1O75459 146 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 C7P10643 843 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 COMTP21964 271 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 MAOBP27338 520 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 IL1R2P27930 398 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 ADRA1BP35368 520 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 RPS24P62847 133 aaKnown RBP20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 SLC25A11Q02978 314 aaKnown RBP20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 MS4A13Q5J8X5 152 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 ATP6V0D2Q8N8Y2 350 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 FIBINQ8TAL6 211 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 MYEOVQ96EZ4 313 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 LMLNQ96KR4 655 aa20.48■□□□□ 0.87
R3HCC1-210ENST00000625275 SLC1A1P43005 524 aa20.47■□□□□ 0.87
R3HCC1-210ENST00000625275 SSR1P43307 286 aaKnown RBP20.47■□□□□ 0.87
R3HCC1-210ENST00000625275 TAS2R40P59535 323 aa20.47■□□□□ 0.87
R3HCC1-210ENST00000625275 SCAPQ12770 1279 aa20.47■□□□□ 0.87
R3HCC1-210ENST00000625275 CDH18Q13634 790 aa20.47■□□□□ 0.87
R3HCC1-210ENST00000625275 ARL13BQ3SXY8 428 aa20.47■□□□□ 0.87
R3HCC1-210ENST00000625275 DCAF12L1Q5VU92 463 aa20.47■□□□□ 0.87
R3HCC1-210ENST00000625275 TXNRD3NBQ6F5E7 133 aa20.47■□□□□ 0.87
R3HCC1-210ENST00000625275 SLFN11Q7Z7L1 901 aa20.47■□□□□ 0.87
R3HCC1-210ENST00000625275 PIP4P1Q86T03 277 aa20.47■□□□□ 0.87
R3HCC1-210ENST00000625275 OR2I1PQ8NGU4 316 aa20.47■□□□□ 0.87
R3HCC1-210ENST00000625275 SLC12A6Q9UHW9 1150 aa20.47■□□□□ 0.87
R3HCC1-210ENST00000625275 A0A1B0GTW7 788 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 METTL12A8MUP2 240 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 PALMO75781 387 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 GGCXP38435 758 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 AIF1P55008 147 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 FOXC1Q12948 553 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 MTA1Q13330 715 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 ST3GAL2Q16842 350 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 FAM124AQ86V42 546 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 CCDC117Q8IWD4 279 aaPredicted RBP20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 CARNMT1Q8N4J0 409 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 ZCCHC9Q8N567 271 aaKnown RBP20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 KIAA1524Q8TCG1 905 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 HAPLN3Q96S86 360 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 SNRNP25Q9BV90 132 aaKnown RBP20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 MAGEB5Q9BZ81 275 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 PCED1AQ9H1Q7 454 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 ZWILCHQ9H900 591 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 PRSS16Q9NQE7 514 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 DNAAF2Q9NVR5 837 aaKnown RBP20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 FZD10Q9ULW2 581 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 HS3ST4Q9Y661 456 aa20.46■□□□□ 0.87
R3HCC1-210ENST00000625275 SPOPO43791 374 aa20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 LUC7L3O95232 432 aaKnown RBP20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 ASLP04424 464 aa20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 CSKP41240 450 aa20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 ZBTB16Q05516 673 aa20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 SMTNL2Q2TAL5 461 aa20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 KCNT1Q5JUK3 1230 aa20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 CHSY1Q86X52 802 aa20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 CFAP52Q8N1V2 620 aa20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 C17orf53Q8N3J3 647 aaPredicted RBP20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 TTC17Q96AE7 1141 aa20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 PRMT1Q99873 361 aaKnown RBP20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 SIK2Q9H0K1 926 aa20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 MIR1-1HGQ9H1L0 117 aa20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 GPATCH2LQ9NWQ4 482 aa20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 SUN2Q9UH99 717 aa20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 INTS6Q9UL03 887 aaKnown RBP20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 SNX10Q9Y5X0 201 aa20.45■□□□□ 0.86
R3HCC1-210ENST00000625275 DOCK9Q9BZ29 2069 aa20.44■□□□□ 0.86
R3HCC1-210ENST00000625275 ST8SIA6P61647 398 aa20.44■□□□□ 0.86
R3HCC1-210ENST00000625275 RPS14P62263 151 aaKnown RBP20.44■□□□□ 0.86
R3HCC1-210ENST00000625275 GRIK2Q13002 908 aa20.44■□□□□ 0.86
R3HCC1-210ENST00000625275 HADHQ16836 314 aaKnown RBP20.44■□□□□ 0.86
R3HCC1-210ENST00000625275 TTC31Q49AM3 519 aaPredicted RBP20.44■□□□□ 0.86
R3HCC1-210ENST00000625275 EFHC2Q5JST6 749 aa20.44■□□□□ 0.86
R3HCC1-210ENST00000625275 ERMARDQ5T6L9 678 aa20.44■□□□□ 0.86
R3HCC1-210ENST00000625275 RAP1GAP2Q684P5 730 aa20.44■□□□□ 0.86
R3HCC1-210ENST00000625275 LGI2Q8N0V4 545 aa20.44■□□□□ 0.86
R3HCC1-210ENST00000625275 MYO19Q96H55 970 aa20.44■□□□□ 0.86
R3HCC1-210ENST00000625275 ZDHHC5Q9C0B5 715 aa20.44■□□□□ 0.86
R3HCC1-210ENST00000625275 KCND1Q9NSA2 647 aa20.44■□□□□ 0.86
R3HCC1-210ENST00000625275 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.44■□□□□ 0.86
R3HCC1-210ENST00000625275 AP4E1Q9UPM8 1137 aa20.44■□□□□ 0.86
R3HCC1-210ENST00000625275 GJB3O75712 270 aa20.43■□□□□ 0.86
R3HCC1-210ENST00000625275 RARAP10276 462 aa20.43■□□□□ 0.86
R3HCC1-210ENST00000625275 TACR2P21452 398 aa20.43■□□□□ 0.86
R3HCC1-210ENST00000625275 GJC1P36383 396 aa20.43■□□□□ 0.86
R3HCC1-210ENST00000625275 CA9Q16790 459 aa20.43■□□□□ 0.86
R3HCC1-210ENST00000625275 BOLA3Q53S33 107 aa20.43■□□□□ 0.86
R3HCC1-210ENST00000625275 FSCBQ5H9T9 825 aa20.43■□□□□ 0.86
R3HCC1-210ENST00000625275 PITRM1Q5JRX3 1037 aa20.43■□□□□ 0.86
R3HCC1-210ENST00000625275 ZNF776Q68DI1 518 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms