RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 BOP1Q14137 746 aaKnown RBP16.38■□□□□ 0.21
GABRB3-215ENST00000622697 ADRM1Q16186 407 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 HIST2H2ACQ16777 129 aaPredicted RBP16.38■□□□□ 0.21
GABRB3-215ENST00000622697 HIST2H2AA3Q6FI13 130 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 CLNKQ7Z7G1 428 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 DAW1Q8N136 415 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 MYLPFQ96A32 169 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 TLCD1Q96CP7 247 aa16.38■□□□□ 0.21
GABRB3-215ENST00000622697 A0A087X1B8 175 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 TTLL13PA6NNM8 815 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 MRPS5P82675 430 aaKnown RBP16.37■□□□□ 0.21
GABRB3-215ENST00000622697 PPM1JQ5JR12 505 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 C1orf127Q8N9H9 656 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 ZNF398Q8TD17 642 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 RCN3Q96D15 328 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 KLRG1Q96E93 195 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 MED8Q96G25 268 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 PLEKHA8Q96JA3 519 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 TRAPPC9Q96Q05 1148 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 SLC25A23Q9BV35 468 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 BBS2Q9BXC9 721 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 MARCH2Q9P0N8 246 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 STXBP5LQ9Y2K9 1186 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 AKR1A1P14550 325 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 GRIA3P42263 894 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 GDF10P55107 478 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 IL27RAQ6UWB1 636 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 PTGR2Q8N8N7 351 aaPredicted RBP16.37■□□□□ 0.21
GABRB3-215ENST00000622697 LENG9Q96B70 501 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 LHX5Q9H2C1 402 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 WDR55Q9H6Y2 383 aaPredicted RBP16.37■□□□□ 0.21
GABRB3-215ENST00000622697 BPIFA1Q9NP55 256 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 MPP6Q9NZW5 540 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 BTRCQ9Y297 605 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 LTA4HP09960 611 aaKnown RBP16.37■□□□□ 0.21
GABRB3-215ENST00000622697 FSTL1Q12841 308 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 PLD5Q8N7P1 536 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 SLC44A1Q8WWI5 657 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 CIPCQ9C0C6 399 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 MGAT4DA6NG13 374 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 RGS5O15539 181 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 HNRNPRO43390 633 aaKnown RBP16.37■□□□□ 0.21
GABRB3-215ENST00000622697 EGFRP00533 1210 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 SERPINA6P08185 405 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 TFEBP19484 476 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 GABRB2P47870 512 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 XRCC4Q13426 336 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 ZDHHC24Q6UX98 284 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 MILR1Q7Z6M3 343 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 TMEM86AQ8N2M4 240 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 PCSK9Q8NBP7 692 aaKnown RBP16.37■□□□□ 0.21
GABRB3-215ENST00000622697 OR52K2Q8NGK3 314 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 MIEF2Q96C03 454 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 COMMD8Q9NX08 183 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 MOXD2PA6NHM9 499 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 TULP2O00295 520 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 FANCGO15287 622 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 RAP1GDS1P52306 607 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 FRG1Q14331 258 aaKnown RBP16.37■□□□□ 0.21
GABRB3-215ENST00000622697 ARCQ7LC44 396 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 CASP10Q92851 521 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 EXOC2Q96KP1 924 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 CATSPERZQ9NTU4 200 aa16.37■□□□□ 0.21
GABRB3-215ENST00000622697 PTGES3LE9PB15 166 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 CILPO75339 1184 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 HSMCR30P0CW71 290 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 RUNX1T1Q06455 604 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 FAM98BQ52LJ0 330 aaKnown RBP16.36■□□□□ 0.21
GABRB3-215ENST00000622697 SAMD4BQ5PRF9 694 aaKnown RBP16.36■□□□□ 0.21
GABRB3-215ENST00000622697 ZFP1Q6P2D0 407 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 CSPG4P5Q96PW8 444 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 MED1Q15648 1581 aaPredicted RBP16.36■□□□□ 0.21
GABRB3-215ENST00000622697 GPR25O00155 361 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 LDLRP01130 860 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 TSHRP16473 764 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 PMF1Q6P1K2 205 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 OR56A4Q8NGH8 313 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 POLR1EQ9GZS1 481 aaKnown RBP16.36■□□□□ 0.21
GABRB3-215ENST00000622697 BPGMP07738 259 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 NUP107P57740 925 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 PYROXD2Q8N2H3 581 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 DNAJB14Q8TBM8 379 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 XPNPEP1Q9NQW7 623 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 UBA2Q9UBT2 640 aaPredicted RBP16.36■□□□□ 0.21
GABRB3-215ENST00000622697 B4GALT4O60513 344 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 CFHP08603 1231 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 RAB27AP51159 221 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 STARD3Q14849 445 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 RNASEH2BQ5TBB1 312 aaKnown RBP16.36■□□□□ 0.21
GABRB3-215ENST00000622697 SEPT3Q9UH03 358 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 MYRFQ9Y2G1 1151 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 PLLPQ9Y342 182 aa16.36■□□□□ 0.21
GABRB3-215ENST00000622697 LZTS3O60299 673 aaPredicted RBP16.35■□□□□ 0.21
GABRB3-215ENST00000622697 TMED10P49755 219 aaKnown RBP16.35■□□□□ 0.21
GABRB3-215ENST00000622697 BNIP1Q12981 228 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 PPIL2Q13356 520 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 VWA5B1Q5TIE3 1220 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 DHDDSQ86SQ9 333 aa16.35■□□□□ 0.21
GABRB3-215ENST00000622697 EMID1Q96A84 441 aaPredicted RBP16.35■□□□□ 0.21
GABRB3-215ENST00000622697 SH3BP4Q9P0V3 963 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms