RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 PRPF39Q86UA1 669 aaKnown RBP9.38□□□□□ -0.91
GGA3-223ENST00000621870 PRELID2Q8N945 189 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 P2RY11Q96G91 374 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 MTO1Q9Y2Z2 717 aaKnown RBP9.38□□□□□ -0.91
GGA3-223ENST00000621870 Q9Y3F1 56 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 LRP6O75581 1613 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 CACNA1FO60840 1977 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 ADGRA3Q8IWK6 1321 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 RAD51BO15315 384 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 KRT6AP02538 564 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 KRT6BP04259 564 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 FAM153BP0C7A2 387 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 OCM2P0CE71 109 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 OCMP0CE72 109 aaPredicted RBP9.38□□□□□ -0.91
GGA3-223ENST00000621870 AMD1P17707 334 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 CYP3A5P20815 502 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 KRT6CP48668 564 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 FAAP100Q0VG06 881 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 EIF2B5Q13144 721 aaKnown RBP9.38□□□□□ -0.91
GGA3-223ENST00000621870 PDE1CQ14123 709 aaPredicted RBP9.38□□□□□ -0.91
GGA3-223ENST00000621870 FAM153CQ494X1 144 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 ZCWPW2Q504Y3 356 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 FAM46CQ5VWP2 391 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 SEL1L3Q68CR1 1132 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 POLNQ7Z5Q5 900 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 LRRC34Q8IZ02 419 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 METTL6Q8TCB7 284 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 HNRNPLLQ8WVV9 542 aaKnown RBP9.38□□□□□ -0.91
GGA3-223ENST00000621870 LPIN3Q9BQK8 851 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 C17orf80Q9BSJ5 609 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 PARVBQ9HBI1 364 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 GID8Q9NWU2 228 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 CHCHD3Q9NX63 227 aaKnown RBP9.38□□□□□ -0.91
GGA3-223ENST00000621870 SH3BP4Q9P0V3 963 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 ZNHIT2Q9UHR6 403 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 RWDD3Q9Y3V2 267 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 CASZ1Q86V15 1759 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 hCG_1818297A0A087WSY0 165 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 A0A1W2PRU2 124 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 YJEFN3A6XGL0 299 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 E7ENQ6 273 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 INPP4BO15327 924 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 NFATC1O95644 943 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 BGNP21810 368 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 CNTFP26441 200 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 HTR1BP28222 390 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 SPIRE1Q08AE8 756 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 GALNT3Q14435 633 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 CRY1Q16526 586 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 FUT11Q495W5 492 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 FOXR2Q6PJQ5 311 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 CEP68Q76N32 757 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 SLC26A9Q7LBE3 791 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 FAR2Q96K12 515 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 ARHGEF4Q9NR80 690 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 CATSPERZQ9NTU4 200 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 KIAA1522Q9P206 1035 aaPredicted RBP9.38□□□□□ -0.91
GGA3-223ENST00000621870 HEY2Q9UBP5 337 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 TLL2Q9Y6L7 1015 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 PTPRJQ12913 1337 aa9.38□□□□□ -0.91
GGA3-223ENST00000621870 E9PBE3 544 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 PSMD12O00232 456 aaPredicted RBP9.37□□□□□ -0.91
GGA3-223ENST00000621870 AKAP10O43572 662 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 KLHL41O60662 606 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 LRCH4O75427 683 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 AP2B1P63010 937 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 SKOR1P84550 965 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 TRIM32Q13049 653 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 PCID2Q5JVF3 399 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 LRRC49Q8IUZ0 686 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 ST13P5Q8NFI4 369 aaPredicted RBP9.37□□□□□ -0.91
GGA3-223ENST00000621870 OR7D4Q8NG98 312 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 OR8D1Q8WZ84 308 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 ELMO1Q92556 727 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 NAF1Q96HR8 494 aaKnown RBP9.37□□□□□ -0.91
GGA3-223ENST00000621870 HNRNPABQ99729 332 aaKnown RBP9.37□□□□□ -0.91
GGA3-223ENST00000621870 SEZ6LQ9BYH1 1024 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 MIEF1Q9NQG6 463 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 FBXO6Q9NRD1 293 aaPredicted RBP9.37□□□□□ -0.91
GGA3-223ENST00000621870 NINJ2Q9NZG7 142 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 VPS51Q9UID3 782 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 PHTF1Q9UMS5 762 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 ABHD14A-ACY1A0A1B0GW23 586 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 RIPK2O43353 540 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 LIASO43766 372 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 SLC25A14O95258 325 aaPredicted RBP9.37□□□□□ -0.91
GGA3-223ENST00000621870 CSF2RAP15509 400 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 TFE3P19532 575 aaPredicted RBP9.37□□□□□ -0.91
GGA3-223ENST00000621870 HNRNPH3P31942 346 aaKnown RBP9.37□□□□□ -0.91
GGA3-223ENST00000621870 IL2P60568 153 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 MPPE1Q53F39 396 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 KIF2BQ8N4N8 673 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 SEC16BQ96JE7 1060 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 SPACA7Q96KW9 195 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 RPL10LQ96L21 214 aaKnown RBP9.37□□□□□ -0.91
GGA3-223ENST00000621870 CSPG4P5Q96PW8 444 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 FUT8Q9BYC5 575 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 ABCG8Q9H221 673 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 DMAC2Q9NW81 257 aa9.37□□□□□ -0.91
GGA3-223ENST00000621870 EVLQ9UI08 416 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms