RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 DPYSQ14117 519 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 TEX44Q53QW1 395 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 VSTM1Q6UX27 236 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 GRIN3AQ8TCU5 1115 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 MLPHQ9BV36 600 aaPredicted RBP10.73□□□□□ -0.69
VPS11-208ENST00000621676 UBXN6Q9BZV1 441 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 CIDEBQ9UHD4 219 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 FARP1Q9Y4F1 1045 aaPredicted RBP10.73□□□□□ -0.69
VPS11-208ENST00000621676 WNT6Q9Y6F9 365 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 H7C4K7 107 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 SCAMP1O15126 338 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 SOD2P04179 222 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 ARL1P40616 181 aaPredicted RBP10.73□□□□□ -0.69
VPS11-208ENST00000621676 ABL2P42684 1182 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 EPHB3P54753 998 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 MPP1Q00013 466 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 SHHQ15465 462 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 TRMT10CQ7L0Y3 403 aaKnown RBP10.73□□□□□ -0.69
VPS11-208ENST00000621676 RASSF3Q86WH2 238 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 MCUQ8NE86 351 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 TEKT4Q8WW24 435 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 TMA16Q96EY4 203 aaKnown RBP10.73□□□□□ -0.69
VPS11-208ENST00000621676 SH3GL2Q99962 352 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 CIPCQ9C0C6 399 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 BFARQ9NZS9 450 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 DNMT3LQ9UJW3 386 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 UBA6A0AVT1 1052 aaPredicted RBP10.73□□□□□ -0.69
VPS11-208ENST00000621676 NEDD8-MDP1E9PL57 170 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 ALOX15BO15296 676 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 HOXA2O43364 376 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 CDH16O75309 829 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 TACR2P21452 398 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 TUFMP49411 452 aaKnown RBP10.73□□□□□ -0.69
VPS11-208ENST00000621676 PRMT2P55345 433 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 PDZD4Q76G19 769 aaPredicted RBP10.73□□□□□ -0.69
VPS11-208ENST00000621676 LRRC6Q86X45 466 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 SLC39A11Q8N1S5 342 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 ZSWIM3Q96MP5 696 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 FBXO6Q9NRD1 293 aaPredicted RBP10.73□□□□□ -0.69
VPS11-208ENST00000621676 AGO1Q9UL18 857 aaKnown RBP10.73□□□□□ -0.69
VPS11-208ENST00000621676 INSL5Q9Y5Q6 135 aa10.73□□□□□ -0.69
VPS11-208ENST00000621676 TDRD15B5MCY1 1934 aaKnown RBP10.72□□□□□ -0.69
VPS11-208ENST00000621676 A0A0G2JND7 137 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 OR6C75A6NL08 312 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 GCAP28676 217 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 TNK2Q07912 1038 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 IHHQ14623 411 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 KCNJ11Q14654 390 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 TEAD2Q15562 447 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 ZNF789Q5FWF6 425 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 GPR158Q5T848 1215 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 ARHGAP12Q8IWW6 846 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 BBOF1Q8ND07 529 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 EXOC4Q96A65 974 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 TGS1Q96RS0 853 aaKnown RBP10.72□□□□□ -0.69
VPS11-208ENST00000621676 TXLNGYQ9BZA5 131 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 ZYG11BQ9C0D3 744 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 SH3BP1Q9Y3L3 701 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 ARL5AQ9Y689 179 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 STC2O76061 302 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 HMGA1P17096 107 aaKnown RBP10.72□□□□□ -0.69
VPS11-208ENST00000621676 SERPINB6P35237 376 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 CCR10P46092 362 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 WNT3AP56704 352 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 GEMIN4P57678 1058 aaKnown RBP10.72□□□□□ -0.69
VPS11-208ENST00000621676 STRA8Q7Z7C7 330 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 ADGRD2Q7Z7M1 963 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 NLRP14Q86W24 1093 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 APCDD1Q8J025 514 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 ATP6V0D2Q8N8Y2 350 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 LPCAT1Q8NF37 534 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 CYB5D2Q8WUJ1 264 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 NT5C3BQ969T7 300 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 CABS1Q96KC9 395 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 QKIQ96PU8 341 aaKnown RBP eCLIP10.72□□□□□ -0.69
VPS11-208ENST00000621676 NOL6Q9H6R4 1146 aaKnown RBP10.72□□□□□ -0.69
VPS11-208ENST00000621676 CATSPERBQ9H7T0 1116 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 SAGE1Q9NXZ1 904 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 SCML2Q9UQR0 700 aa10.72□□□□□ -0.69
VPS11-208ENST00000621676 MAP1BP46821 2468 aaKnown RBP10.72□□□□□ -0.69
VPS11-208ENST00000621676 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.71□□□□□ -0.69
VPS11-208ENST00000621676 ARHGEF37A1IGU5 675 aa10.71□□□□□ -0.69
VPS11-208ENST00000621676 SMAD6O43541 496 aaKnown RBP10.71□□□□□ -0.69
VPS11-208ENST00000621676 LPXNO60711 386 aa10.71□□□□□ -0.69
VPS11-208ENST00000621676 RHOCP08134 193 aa10.71□□□□□ -0.69
VPS11-208ENST00000621676 ZFXP17010 805 aaPredicted RBP10.71□□□□□ -0.69
VPS11-208ENST00000621676 TNFRSF8P28908 595 aa10.71□□□□□ -0.69
VPS11-208ENST00000621676 TYK2P29597 1187 aa10.71□□□□□ -0.69
VPS11-208ENST00000621676 PHBP35232 272 aa10.71□□□□□ -0.69
VPS11-208ENST00000621676 CTSOP43234 321 aaPredicted RBP10.71□□□□□ -0.69
VPS11-208ENST00000621676 EPHB1P54762 984 aa10.71□□□□□ -0.69
VPS11-208ENST00000621676 ZNF177Q13360 481 aaPredicted RBP10.71□□□□□ -0.69
VPS11-208ENST00000621676 CCDC85BQ15834 202 aaPredicted RBP10.71□□□□□ -0.69
VPS11-208ENST00000621676 TMEM240Q5SV17 173 aa10.71□□□□□ -0.69
VPS11-208ENST00000621676 ZNF534Q76KX8 674 aa10.71□□□□□ -0.69
VPS11-208ENST00000621676 OR13C4Q8NGS5 318 aa10.71□□□□□ -0.69
VPS11-208ENST00000621676 NSMCE1Q8WV22 266 aa10.71□□□□□ -0.69
VPS11-208ENST00000621676 CYP4F12Q9HCS2 524 aa10.71□□□□□ -0.69
VPS11-208ENST00000621676 SDR42E2A6NKP2 422 aa10.71□□□□□ -0.69
VPS11-208ENST00000621676 WASH3PC4AMC7 463 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms