RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 CDK9P50750 372 aaKnown RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 AMPD2Q01433 879 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 DCAF6Q58WW2 860 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 VN1R5Q7Z5H4 357 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 PACS2Q86VP3 889 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 DCP1BQ8IZD4 617 aaKnown RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 FSTL5Q8N475 847 aaPredicted RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 SMYD1Q8NB12 490 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 EPS8L3Q8TE67 593 aaKnown RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 UBE2E3Q969T4 207 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 EIF2AK1Q9BQI3 630 aaKnown RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 SENP2Q9HC62 589 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 GMIPQ9P107 970 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 MORF4L1Q9UBU8 362 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 LIMD1Q9UGP4 676 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 PTGES3LE9PB15 166 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 UNC5CO95185 931 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 NR2F6P10588 404 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 PEPDP12955 493 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 ITGALP20701 1170 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 MSR1P21757 451 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 TMEM62Q0P6H9 643 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 NCOA4Q13772 614 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 TOB2Q14106 344 aaPredicted RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 ANO7Q6IWH7 933 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 GLB1LQ6UWU2 654 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 ARCQ7LC44 396 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 IPMKQ8NFU5 416 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 CKAP2Q8WWK9 683 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 CDCA5Q96FF9 252 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 VCPIP1Q96JH7 1222 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 RERGLQ9H628 205 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 SPAG4Q9NPE6 437 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 NUP50Q9UKX7 468 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 ABCG2Q9UNQ0 655 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 PLAGL2Q9UPG8 496 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 ABCA6Q8N139 1617 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 F5H423 210 aaPredicted RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 GH1P01241 217 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 GSTT2BP0CG30 244 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 PRG2P13727 222 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 SOX11P35716 441 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 CAMK1Q14012 370 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 TMEM132DQ14C87 1099 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 NR6A1Q15406 480 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 LCN1P1Q5VSP4 162 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 DNAAF5Q86Y56 855 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 FAM126BQ8IXS8 530 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 CDC42EP4Q9H3Q1 356 aaKnown RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 CLDND1Q9NY35 253 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 ZNF232Q9UNY5 417 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 PCDHA10Q9Y5I2 948 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 H0YJX3 145 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 CDC25AP30304 524 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 HARS2P49590 506 aaKnown RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 ALDH5A1P51649 535 aaPredicted RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 CXCL9Q07325 125 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 TWF1Q12792 350 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 MPP3Q13368 585 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 USF2Q15853 346 aaPredicted RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 ALKBH2Q6NS38 261 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 SYCE2Q6PIF2 218 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 TXNDC11Q6PKC3 985 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 REXO1L1PQ8IX06 675 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 PIAS4Q8N2W9 510 aaPredicted RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 APOL2Q9BQE5 337 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 NFKBIZQ9BYH8 718 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 AASSQ9UDR5 926 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 POLR1DQ9Y2S0 133 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 PRMT5O14744 637 aaPredicted RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 NOL4O94818 638 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 PTENP60484 403 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 OVGP1Q12889 678 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 PPIL2Q13356 520 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 OTUD3Q5T2D3 398 aaPredicted RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 DNAJB7Q7Z6W7 309 aaPredicted RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 ALYREFQ86V81 257 aaKnown RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 C10orf107Q8IVU9 208 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 FAM71DQ8N9W8 422 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 NOA1Q8NC60 698 aaKnown RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 PABPC5Q96DU9 382 aaKnown RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 TEFMQ96QE5 360 aaKnown RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 EXO5Q9H790 373 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 NOL11Q9H8H0 719 aaKnown RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 CCDC177Q9NQR7 707 aaPredicted RBP7.27□□□□□ -1.25
COLCA1-205ENST00000620864 DNAJC11Q9NVH1 559 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 TMED5Q9Y3A6 229 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 NR2E1Q9Y466 385 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 DIP2AQ14689 1571 aa7.27□□□□□ -1.25
COLCA1-205ENST00000620864 FAM240BA0A1B0GVZ2 78 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 M0QX08 132 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 PLOD3O60568 738 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 SIN3BO75182 1162 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 THPOP40225 353 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 RBM34P42696 430 aaKnown RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 PTDSS1P48651 473 aaKnown RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 PLA2G4EQ3MJ16 856 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 PRPF38BQ5VTL8 546 aaKnown RBP7.26□□□□□ -1.25
COLCA1-205ENST00000620864 GRHL2Q6ISB3 625 aa7.26□□□□□ -1.25
COLCA1-205ENST00000620864 XRRA1Q6P2D8 792 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms