RNA–Protein interactions for RNA: ENST00000620254.4

CYFIP2-222, Transcript of cytoplasmic FMR1 interacting protein 2, human

APPRIS P1 TSL 1 (best) BASIC

Gene CYFIP2, Length 4,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYFIP2-222	ENST00000620254	KLHL38	Q2WGJ6	581 aa		13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	LINGO4	Q6UY18	593 aa		13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	CROCCP2	Q86T23	111 aa		13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	MAN1C1	Q9NR34	630 aa		13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	CFAP97	Q9P2B7	532 aa		13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	UXT	Q9UBK9	157 aa	Predicted RBP	13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	SZT2	Q5T011	3432 aa		13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	ERVK-10	P10266	1014 aa		13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	LRRC8B	Q6P9F7	803 aa		13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	ING5	Q8WYH8	240 aa		13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	HERVK_113	Q902F9	699 aa		13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	APOL5	Q9BWW9	433 aa		13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	MTIF3	Q9H2K0	278 aa	Known RBP	13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	BFAR	Q9NZS9	450 aa		13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	FNIP2	Q9P278	1114 aa		13.51	□□□□□ -0.25
CYFIP2-222	ENST00000620254	TBL1X	O60907	577 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	LSP1	P33241	339 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	UMODL1-AS1	Q8N2C9	162 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	GCNA	Q96QF7	691 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	RXFP1	Q9HBX9	757 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	ASAH2	Q9NR71	780 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	CHRAC1	Q9NRG0	131 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	RHOC	P08134	193 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	ATP5D	P30049	168 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	PBX2	P40425	430 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	CCR2	P41597	374 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	MAGEA6	P43360	314 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	MPP2	Q14168	576 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	RABGAP1L	Q5R372	815 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	MRPL43	Q8N983	215 aa	Known RBP	13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	MFSD3	Q96ES6	412 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	KLF16	Q9BXK1	252 aa	Predicted RBP	13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254		H0Y626	953 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	SLC4A1	P02730	911 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	MMP13	P45452	471 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	SKOR1	P84550	965 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	ZNF177	Q13360	481 aa	Predicted RBP	13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	ZNF235	Q14590	738 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	TIGD7	Q6NT04	549 aa	Predicted RBP	13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	BCAS4	Q8TDM0	211 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	TRMT2B	Q96GJ1	504 aa	Known RBP	13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	ZNF778	Q96MU6	729 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	ATP13A1	Q9HD20	1204 aa		13.5	□□□□□ -0.25
CYFIP2-222	ENST00000620254	KRT4	P19013	534 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	CBX2	Q14781	532 aa	Predicted RBP	13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	MROH9	Q5TGP6	573 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	GSDMB	Q8TAX9	411 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	OVCA2	Q8WZ82	227 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	VAT1	Q99536	393 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	SH3BP1	Q9Y3L3	701 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	STX2	P32856	288 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	HTR7	P34969	479 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	SHH	Q15465	462 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	ANO4	Q32M45	955 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	ADGRF1	Q5T601	910 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	RNF219	Q5W0B1	726 aa	Predicted RBP	13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	FOXR1	Q6PIV2	292 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	CCDC149	Q6ZUS6	474 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	C12orf76	Q8N812	135 aa	Predicted RBP	13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	DDI1	Q8WTU0	396 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	MAML1	Q92585	1016 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	PLD4	Q96BZ4	506 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	TSGA13	Q96PP4	275 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	ALPK3	Q96L96	1907 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	IGLV3-10	A0A075B6K4	115 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	CA4	P22748	312 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	NDST2	P52849	883 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	NRG1	Q02297	640 aa	Predicted RBP	13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	GNA12	Q03113	381 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	CRYM	Q14894	314 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	LRRC6	Q86X45	466 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	ARNTL2	Q8WYA1	636 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	SMC6	Q96SB8	1091 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	IL12RB2	Q99665	862 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	TBL1Y	Q9BQ87	522 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	CCL26	Q9Y258	94 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	SSX2IP	Q9Y2D8	614 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	WDR91	A4D1P6	747 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	DRGX	A6NNA5	263 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	SNAP91	O60641	907 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	PIRT	P0C851	137 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	MAGEA3	P43357	314 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	CREM	Q03060	361 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	PABPC1L	Q4VXU2	614 aa	Known RBP	13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	GPR158	Q5T848	1215 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	TRABD2A	Q86V40	505 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	DCAKD	Q8WVC6	231 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	LRRC40	Q9H9A6	602 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	PCDHA11	Q9Y5I1	949 aa		13.49	□□□□□ -0.25
CYFIP2-222	ENST00000620254	KIAA1671	Q9BY89	1806 aa		13.48	□□□□□ -0.25
CYFIP2-222	ENST00000620254	TRIM49D1	C9J1S8	452 aa		13.48	□□□□□ -0.25
CYFIP2-222	ENST00000620254	C1R	P00736	705 aa		13.48	□□□□□ -0.25
CYFIP2-222	ENST00000620254	GBP2	P32456	591 aa	Predicted RBP	13.48	□□□□□ -0.25
CYFIP2-222	ENST00000620254	RENBP	P51606	427 aa		13.48	□□□□□ -0.25
CYFIP2-222	ENST00000620254	CDK16	Q00536	496 aa		13.48	□□□□□ -0.25
CYFIP2-222	ENST00000620254	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms