RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 C17orf102A2RUQ5 167 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 PRR23AA6NEV1 266 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 MBD3L5A6NJ08 208 aaPredicted RBP3.13□□□□□ -1.91
TARDBP-220ENST00000618606 SLC38A8A6NNN8 435 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 ERI2A8K979 691 aaKnown RBP3.13□□□□□ -1.91
TARDBP-220ENST00000618606 BUB3O43684 328 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 PLA2G6O60733 806 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 TMCC1O94876 653 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 LARGE1O95461 756 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 ENO3P13929 434 aaPredicted RBP3.13□□□□□ -1.91
TARDBP-220ENST00000618606 PRKCHP24723 683 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 CYP2J2P51589 502 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 ALDH18A1P54886 795 aaKnown RBP3.13□□□□□ -1.91
TARDBP-220ENST00000618606 TMPRSS3P57727 454 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 RBM39Q14498 530 aaKnown RBP3.13□□□□□ -1.91
TARDBP-220ENST00000618606 SAFBQ15424 915 aaKnown RBP eCLIP3.13□□□□□ -1.91
TARDBP-220ENST00000618606 TRIM60Q495X7 471 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 C5orf22Q49AR2 442 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 COBLL1Q53SF7 1204 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 FAM171A1Q5VUB5 890 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 MON1BQ7L1V2 547 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 ZNF771Q7L3S4 317 aaPredicted RBP3.13□□□□□ -1.91
TARDBP-220ENST00000618606 LILRB1Q8NHL6 650 aaPredicted RBP3.13□□□□□ -1.91
TARDBP-220ENST00000618606 RSC1A1Q92681 617 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 SARGQ9BW04 601 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 TMEM120AQ9BXJ8 343 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 TP63Q9H3D4 680 aaPredicted RBP3.13□□□□□ -1.91
TARDBP-220ENST00000618606 TCF7L2Q9NQB0 619 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 TMEM248Q9NWD8 314 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 DONSONQ9NYP3 566 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 IGSF9Q9P2J2 1179 aa3.13□□□□□ -1.91
TARDBP-220ENST00000618606 SRPRBQ9Y5M8 271 aaKnown RBP3.13□□□□□ -1.91
TARDBP-220ENST00000618606 TP53BP1Q12888 1972 aaPredicted RBP3.12□□□□□ -1.91
TARDBP-220ENST00000618606 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.12□□□□□ -1.91
TARDBP-220ENST00000618606 DNPH1O43598 174 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 PRPH2P23942 346 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 HSPA7P48741 367 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 TAF6P49848 677 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 OAZ1P54368 228 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 CDH12P55289 794 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 MPEG1Q2M385 716 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 ZACNQ401N2 412 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 EFHC1Q5JVL4 640 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 IZUMO3Q5VZ72 239 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 MTFR2Q6P444 385 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 ZNF449Q6P9G9 518 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 HDAC7Q8WUI4 952 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 GFM1Q96RP9 751 aaKnown RBP3.12□□□□□ -1.91
TARDBP-220ENST00000618606 SLC22A11Q9NSA0 550 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 CNTN6Q9UQ52 1028 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 FAM50BQ9Y247 325 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 SLC45A1Q9Y2W3 748 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 PCDHA10Q9Y5I2 948 aa3.12□□□□□ -1.91
TARDBP-220ENST00000618606 FAM90A18PA6NE21 464 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 FAM90A16PA6NEW6 464 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 FAM90A9PA6NNJ1 464 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 FAM90A5PA8MXJ8 464 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 APAF1O14727 1248 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 PIP5K1BO14986 540 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 RNMTO43148 476 aaKnown RBP3.11□□□□□ -1.91
TARDBP-220ENST00000618606 SERPINI2O75830 405 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 SERPINB2P05120 415 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 FAM90A15PP0C7V4 464 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 FAM90A14PP0C7W9 464 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 TM4SF4P48230 202 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 CDK7P50613 346 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 RCAN1P53805 252 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 SF3A3Q12874 501 aaKnown RBP eCLIP3.11□□□□□ -1.91
TARDBP-220ENST00000618606 WDR75Q8IWA0 830 aaKnown RBP3.11□□□□□ -1.91
TARDBP-220ENST00000618606 IPO4Q8TEX9 1081 aaKnown RBP3.11□□□□□ -1.91
TARDBP-220ENST00000618606 RIPOR3Q96MK2 946 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 FRG2BQ96QU4 278 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 HDHD5Q9BXW7 423 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 STK33Q9BYT3 514 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.11□□□□□ -1.91
TARDBP-220ENST00000618606 SEL1LQ9UBV2 794 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 CDH22Q9UJ99 828 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 CEP83Q9Y592 693 aa3.11□□□□□ -1.91
TARDBP-220ENST00000618606 LINC01553A4QN01 128 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 TMEM247A6NEH6 219 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 AGAP5A6NIR3 686 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 PMM2O15305 246 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 FCGR2AP12318 317 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 TYK2P29597 1187 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 SYTL3Q4VX76 610 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 CEP85LQ5SZL2 805 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 KIAA1324Q6UXG2 1013 aaKnown RBP3.1□□□□□ -1.91
TARDBP-220ENST00000618606 C11orf96Q7Z7L8 435 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 SERPINA11Q86U17 422 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 PALB2Q86YC2 1186 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 RBFAQ8N0V3 343 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 MIGA1Q8NAN2 632 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 ZNF114Q8NC26 417 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 C18orf8Q96DM3 657 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 PRPF18Q99633 342 aaKnown RBP3.1□□□□□ -1.91
TARDBP-220ENST00000618606 PDE11AQ9HCR9 933 aa3.1□□□□□ -1.91
TARDBP-220ENST00000618606 LIN7CQ9NUP9 197 aaKnown RBP3.1□□□□□ -1.91
TARDBP-220ENST00000618606 SLC39A10Q9ULF5 831 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms