RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 DPEP3Q9H4B8 488 aa7.12□□□□□ -1.27
SCAMP1-206ENST00000618166 ABCB8Q9NUT2 735 aa7.12□□□□□ -1.27
SCAMP1-206ENST00000618166 PCMTD2Q9NV79 361 aa7.12□□□□□ -1.27
SCAMP1-206ENST00000618166 SALL4Q9UJQ4 1053 aa7.12□□□□□ -1.27
SCAMP1-206ENST00000618166 CDH9Q9ULB4 789 aa7.12□□□□□ -1.27
SCAMP1-206ENST00000618166 PADI4Q9UM07 663 aa7.12□□□□□ -1.27
SCAMP1-206ENST00000618166 SCML1Q9UN30 329 aa7.12□□□□□ -1.27
SCAMP1-206ENST00000618166 DMTF1Q9Y222 760 aa7.12□□□□□ -1.27
SCAMP1-206ENST00000618166 C2CD2Q9Y426 696 aa7.12□□□□□ -1.27
SCAMP1-206ENST00000618166 TNRC6AQ8NDV7 1962 aaKnown RBP7.12□□□□□ -1.27
SCAMP1-206ENST00000618166 CSPG4Q6UVK1 2322 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 ACANP16112 2415 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 A0A0B4J269 797 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 RAD1O60671 282 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 JAK2O60674 1132 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 HMBSP08397 361 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 DLDP09622 509 aaKnown RBP7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 HOXD9P28356 352 aaPredicted RBP7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 CDC25AP30304 524 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 NOS2P35228 1153 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 LHX1P48742 406 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 HDAC4P56524 1084 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 HNRNPKP61978 463 aaKnown RBP eCLIP7.11□□□□□ -1.278e-8■■■■□ 26.2
SCAMP1-206ENST00000618166 ZFP36L1Q07352 338 aaKnown RBP7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 C1orf61Q13536 156 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 PTK2BQ14289 1009 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 FZD2Q14332 565 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 C9orf64Q5T6V5 341 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 MBLAC2Q68D91 279 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 GCNT7Q6ZNI0 430 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 RBFAQ8N0V3 343 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 C1orf127Q8N9H9 656 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 WFDC5Q8TCV5 224 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 GPBAR1Q8TDU6 330 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 DDI1Q8WTU0 396 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 NAT6Q93015 286 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 FAM129BQ96TA1 746 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 SLC29A3Q9BZD2 475 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 GPN2Q9H9Y4 310 aaPredicted RBP7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 CYP4F12Q9HCS2 524 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 NCKIPSDQ9NZQ3 722 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 AGO1Q9UL18 857 aaKnown RBP7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 JMJD1CQ15652 2540 aa7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 ARHGEF17Q96PE2 2063 aaPredicted RBP7.11□□□□□ -1.27
SCAMP1-206ENST00000618166 CUBNO60494 3623 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 VPS13CQ709C8 3753 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 TTC34A8MYJ7 566 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 E9PMD0 336 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 HNRNPDLO14979 420 aaKnown RBP7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 RNASEH1O60930 286 aaKnown RBP7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 RTN3O95197 1032 aaPredicted RBP7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 CSF2P04141 144 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 NME1P15531 152 aaKnown RBP7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 CD1EP15812 388 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 RPA1P27694 616 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 PTGER4P35408 488 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 PNPLA4P41247 253 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 LIG4P49917 911 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 RNASE9P60153 205 aaKnown RBP7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 RAC1P63000 192 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 LTBQ06643 244 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 SKOR2Q2VWA4 1001 aaPredicted RBP7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 HNRNPA1L2Q32P51 320 aaKnown RBP7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 CEP135Q66GS9 1140 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 ZNF517Q6ZMY9 492 aaPredicted RBP7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 Q6ZSR6 202 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 Q6ZUG5 572 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 ZNF438Q7Z4V0 828 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 STK40Q8N2I9 435 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 TOP6BLQ8N6T0 577 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 KYQ8NBH2 561 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 STARD8Q92502 1023 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 TMEM74Q96NL1 305 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 IL12RB2Q99665 862 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 CMKLR1Q99788 373 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 NTPCRQ9BSD7 190 aaKnown RBP7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 SRRTQ9BXP5 876 aaKnown RBP7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 B3GNT5Q9BYG0 378 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 TRIM55Q9BYV6 548 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 CDH19Q9H159 772 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 IKZF4Q9H2S9 585 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 ASB7Q9H672 318 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 NMUR1Q9HB89 426 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 GDAP2Q9NXN4 497 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 SIRPGQ9P1W8 387 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 SUN2Q9UH99 717 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 GGA2Q9UJY4 613 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 RCAN3Q9UKA8 241 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 PNMA8BQ9ULN7 279 aaPredicted RBP7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 USP3Q9Y6I4 520 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 RNF215Q9Y6U7 377 aa7.1□□□□□ -1.27
SCAMP1-206ENST00000618166 FAM92AA1XBS5 289 aa7.09□□□□□ -1.27
SCAMP1-206ENST00000618166 VWA3AA6NCI4 1184 aa7.09□□□□□ -1.27
SCAMP1-206ENST00000618166 ANKUB1A6NFN9 424 aa7.09□□□□□ -1.27
SCAMP1-206ENST00000618166 A6NJY4 79 aa7.09□□□□□ -1.27
SCAMP1-206ENST00000618166 TMX2-CTNND1H3BSU7 103 aa7.09□□□□□ -1.27
SCAMP1-206ENST00000618166 LRRTM2O43300 516 aa7.09□□□□□ -1.27
SCAMP1-206ENST00000618166 PLRG1O43660 514 aaKnown RBP7.09□□□□□ -1.27
SCAMP1-206ENST00000618166 NEMFO60524 1076 aa7.09□□□□□ -1.27
SCAMP1-206ENST00000618166 PPP6R2O75170 966 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms