RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 TCAF2A6NFQ2 919 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 GOLGA8MH3BSY2 632 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 RASGRF2O14827 1237 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 RNF40O75150 1001 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 ACSL3O95573 720 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 CPP00450 1065 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 CYBBP04839 570 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 IRF1P10914 325 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 VAV1P15498 845 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 PTPN3P26045 913 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 AVPR1AP37288 418 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 SLC7A9P82251 487 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 CBLBQ13191 982 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 UAP1Q16222 522 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 KYNUQ16719 465 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 KLHL38Q2WGJ6 581 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 AGBL2Q5U5Z8 902 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 NAPEPLDQ6IQ20 393 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 B4GALNT4Q76KP1 1039 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 C14orf80Q86SX3 495 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 NLRP14Q86W24 1093 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 ZNF567Q8N184 647 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 TAB3Q8N5C8 712 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 NPWQ8N729 165 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 ZNF557Q8N988 423 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 SLC39A8Q9C0K1 460 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 GBA3Q9H227 469 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 PIDD1Q9HB75 910 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 NINJ2Q9NZG7 142 aa17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 IPO11Q9UI26 975 aaKnown RBP17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 ZNF638Q14966 1978 aaKnown RBP17.13■□□□□ 0.33
TRAPPC3-210ENST00000617904 C2orf78A6NCI8 922 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 RASA4BC9J798 803 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 E7ESA3 106 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 KCNK1O00180 336 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 CCL16O15467 120 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 RGS16O15492 202 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 RASA4O43374 803 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 OLFM2O95897 454 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 ASGR2P07307 311 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 PAPOLAP51003 745 aaKnown RBP17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 GEMP55040 296 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 IL10RBQ08334 325 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 HNRNPDQ14103 355 aaKnown RBP17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 MARC1Q5VT66 337 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 AFMIDQ63HM1 303 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 TMC5Q6UXY8 1006 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 ZNF783Q6ZMS7 281 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 TAOK1Q7L7X3 1001 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 TFAP2DQ7Z6R9 452 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 SETD3Q86TU7 594 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 CCDC33Q8N5R6 958 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 ARL14EPQ8N8R7 260 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 TDRD5Q8NAT2 981 aaKnown RBP17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 HJURPQ8NCD3 748 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 TEKT5Q96M29 485 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 ZNF599Q96NL3 588 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 SERPINB12Q96P63 405 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 LRRC40Q9H9A6 602 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 IL21Q9HBE4 155 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 ZNF334Q9HCZ1 680 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 BCCIPQ9P287 314 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 LIMD1Q9UGP4 676 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 IKBKGQ9Y6K9 419 aa17.12■□□□□ 0.33
TRAPPC3-210ENST00000617904 DENND4AQ7Z401 1863 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 METTL18O95568 372 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 JCHAINP01591 159 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 RHOCP08134 193 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 STX2P32856 288 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 WASHC5Q12768 1159 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 NR1H3Q13133 447 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 GPR149Q86SP6 731 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 ZNF683Q8IZ20 524 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 MAB21L3Q8N8X9 362 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 FAM76AQ8TAV0 307 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 ATP6V1G3Q96LB4 118 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 C9orf72Q96LT7 481 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 AGAP3Q96P47 875 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 SFXN1Q9H9B4 322 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 TMBIM4Q9HC24 238 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 DNAJC17Q9NVM6 304 aaKnown RBP17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 SAMD15Q9P1V8 674 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 STOML2Q9UJZ1 356 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 AGO1Q9UL18 857 aaKnown RBP17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 NEU3Q9UQ49 428 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 CPQQ9Y646 472 aa17.11■□□□□ 0.33
TRAPPC3-210ENST00000617904 EXOC1LA0A1B0GW35 172 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 TLDC2A0PJX2 215 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 ILVBLA1L0T0 632 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 MAGEB16A2A368 324 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 TP73O15350 636 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 MAFKO60675 156 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 TCEA3O75764 348 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 IFNAR2P48551 515 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 EPHA5P54756 1037 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 ZNF844Q08AG5 666 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 RFTN1Q14699 578 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 GPR158Q5T848 1215 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 ANKRD22Q5VYY1 191 aa17.1■□□□□ 0.33
TRAPPC3-210ENST00000617904 TXNDC8Q6A555 127 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms