RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 RHBDF2Q6PJF5 856 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 PARM1Q6UWI2 310 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 MFN1Q8IWA4 741 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 CCDC13Q8IYE1 715 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 IRF7Q92985 503 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 RAB17Q9H0T7 212 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 EPN3Q9H201 632 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 NEUROG2Q9H2A3 272 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 KIF9Q9HAQ2 790 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 SPHK2Q9NRA0 654 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 TBC1D30Q9Y2I9 924 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 RAD54BQ9Y620 910 aa16.62■□□□□ 0.25
SNAP47-213ENST00000617596 GRXCR2A6NFK2 248 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 ARSAP15289 507 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 FOSL2P15408 326 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 TCF3P15923 654 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 MTHFRP42898 656 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 TNK2Q07912 1038 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 ACTN3Q08043 901 aaPredicted RBP16.61■□□□□ 0.25
SNAP47-213ENST00000617596 CRYMQ14894 314 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 P3H1Q32P28 736 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 C6orf118Q5T5N4 469 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 TTC39BQ5VTQ0 682 aaPredicted RBP16.61■□□□□ 0.25
SNAP47-213ENST00000617596 RNF219Q5W0B1 726 aaPredicted RBP16.61■□□□□ 0.25
SNAP47-213ENST00000617596 IL31Q6EBC2 164 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 VITQ6UXI7 678 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 NAT16Q8N8M0 369 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 ARHGEF2Q92974 986 aaKnown RBP16.61■□□□□ 0.25
SNAP47-213ENST00000617596 BBS2Q9BXC9 721 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 MUC3BQ9H195 1237 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 EBF3Q9H4W6 596 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 PCDH9Q9HC56 1237 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 ZFP14Q9HCL3 533 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 TBC1D14Q9P2M4 693 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 NFU1Q9UMS0 254 aa16.61■□□□□ 0.25
SNAP47-213ENST00000617596 CCDC189A1A4V9 331 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 OTOL1A6NHN0 477 aaPredicted RBP16.6■□□□□ 0.25
SNAP47-213ENST00000617596 ARHGAP42A6NI28 874 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 TRIM24O15164 1050 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 JCHAINP01591 159 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 PTPN3P26045 913 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 WEE1P30291 646 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 SERINC3Q13530 473 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 SYDE1Q6ZW31 735 aaPredicted RBP16.6■□□□□ 0.25
SNAP47-213ENST00000617596 IFT20Q8IY31 132 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 ZNF567Q8N184 647 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 MREGQ8N565 214 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 TTC8Q8TAM2 541 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 OSCP1Q8WVF1 389 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 AGAP3Q96P47 875 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 UBE2ZQ9H832 354 aaPredicted RBP16.6■□□□□ 0.25
SNAP47-213ENST00000617596 GRHL1Q9NZI5 618 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 DOCK8Q8NF50 2099 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 COL6A3P12111 3177 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 NYNRINQ9P2P1 1898 aaKnown RBP16.6■□□□□ 0.25
SNAP47-213ENST00000617596 MYOFQ9NZM1 2061 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 CFAP69A5D8W1 941 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 BHMG1C9JSJ3 638 aaPredicted RBP16.6■□□□□ 0.25
SNAP47-213ENST00000617596 CYBBP04839 570 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 TYRP14679 529 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 CSKP41240 450 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 PLTPP55058 493 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 HLTFQ14527 1009 aaKnown RBP eCLIP16.6■□□□□ 0.25
SNAP47-213ENST00000617596 EML3Q32P44 896 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 PARP15Q460N3 678 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 SETD3Q86TU7 594 aaPredicted RBP16.6■□□□□ 0.25
SNAP47-213ENST00000617596 SEC14L1Q92503 715 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 SUSD6Q92537 303 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 MIEF2Q96C03 454 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 RTP4Q96DX8 246 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 RUFY1Q96T51 708 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 TRPV4Q9HBA0 871 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 TTLL3Q9Y4R7 772 aa16.6■□□□□ 0.25
SNAP47-213ENST00000617596 ILVBLA1L0T0 632 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 CBX4O00257 560 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 TP73O15350 636 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 SNAP91O60641 907 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 METTL18O95568 372 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 CCNB1P14635 433 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 CCNCP24863 283 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 ECHS1P30084 290 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 CD70P32970 193 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 IFNAR2P48551 515 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 YBEYP58557 167 aaPredicted RBP16.59■□□□□ 0.25
SNAP47-213ENST00000617596 DHCR24Q15392 516 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 HABP4Q5JVS0 413 aaKnown RBP16.59■□□□□ 0.25
SNAP47-213ENST00000617596 ANKRD20A2Q5SQ80 823 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 ANKRD20A1Q5TYW2 823 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 ANKRD20A3Q5VUR7 823 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 ASTLQ6HA08 431 aaPredicted RBP16.59■□□□□ 0.25
SNAP47-213ENST00000617596 APCDD1Q8J025 514 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.59■□□□□ 0.253e-10■■■■■ 88.3
SNAP47-213ENST00000617596 GDAP1L1Q96MZ0 367 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 TSGA13Q96PP4 275 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 SP110Q9HB58 689 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 ATP13A1Q9HD20 1204 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 KLC4Q9NSK0 619 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 NUP210Q8TEM1 1887 aaPredicted RBP16.59■□□□□ 0.25
SNAP47-213ENST00000617596 SHROOM3Q8TF72 1996 aa16.59■□□□□ 0.25
SNAP47-213ENST00000617596 A0A0A0MRY4 1105 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms