RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 BTBD8Q5XKL5 378 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 ADGRD1Q6QNK2 874 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 NPWQ8N729 165 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 ZNF778Q96MU6 729 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 ZBED2Q9BTP6 218 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 SLC24A2Q9UI40 661 aa14.76□□□□□ -0.05
SHROOM1-208ENST00000617339 SUPT3HO75486 399 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 APOEP02649 317 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 ASLP04424 464 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 ABHD2P08910 425 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 SNRPAP09012 282 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 MAXP61244 160 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 NOMO2Q5JPE7 1267 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 OR10T2Q8NGX3 314 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 URGCPQ8TCY9 931 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 SGF29Q96ES7 293 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 HSFY1Q96LI6 401 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 HNRNPABQ99729 332 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 CHRAC1Q9NRG0 131 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 FZD10Q9ULW2 581 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 PRR5-ARHGAP8B1AHC4 643 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 IMPDH2P12268 514 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 TYK2P29597 1187 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 ARHGAP8P85298 464 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 PEX6Q13608 980 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 DPYSL2Q16555 572 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 ARHGAP17Q68EM7 881 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 TMPRSS6Q8IU80 811 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 RNF135Q8IUD6 432 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 TTC9BQ8N6N2 239 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 COLEC11Q9BWP8 271 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 DNAJB4Q9UDY4 337 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 TMCO1Q9UM00 188 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 EFR3BQ9Y2G0 817 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 LRIG2O94898 1065 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 DLDP09622 509 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 SLC9A4Q6AI14 798 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 GDPD5Q8WTR4 605 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 PPP1R10Q96QC0 940 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 FOXP3Q9BZS1 431 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 GRIP2Q9C0E4 1043 aa14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 TDRKHQ9Y2W6 561 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-208ENST00000617339 ALDH1A1P00352 501 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 NFKB1P19838 968 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 AQP5P55064 265 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 ADAM17P78536 824 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 RALGPS1Q5JS13 557 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 PAOXQ6QHF9 649 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 PABPC5Q96DU9 382 aaKnown RBP14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 SCLYQ96I15 445 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 NDFIP2Q9NV92 336 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 DAOAP59103 153 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 TCHHL1Q5QJ38 904 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 RABGAP1LQ5R372 815 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 SDCCAG8Q86SQ7 713 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 TAC4Q86UU9 113 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 SLC38A7Q9NVC3 462 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 APPL1Q9UKG1 709 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 VANGL2Q9ULK5 521 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 TRDMT1O14717 391 aaKnown RBP14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 CHADO15335 359 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 SEPT4O43236 478 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 B4GALT3O60512 393 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 ENDOD1O94919 500 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 KCNE1P15382 129 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 PDK3Q15120 406 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 TTC39BQ5VTQ0 682 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 IYDQ6PHW0 289 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 CIR1Q86X95 450 aaPredicted RBP14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 SLC44A1Q8WWI5 657 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 SIGLEC10Q96LC7 697 aa14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 EBNA1BP2Q99848 306 aaKnown RBP14.74□□□□□ -0.05
SHROOM1-208ENST00000617339 AXLP30530 894 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 PTPN7P35236 360 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 PTPN9P43378 593 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 ATXN3P54252 364 aaPredicted RBP14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 TRMT5Q32P41 509 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 KCNN1Q92952 543 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 GDAP2Q9NXN4 497 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 A0A0A0MRY4 1105 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 KRT38O76015 456 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 EFEMP1Q12805 493 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 ARL13BQ3SXY8 428 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 LGSNQ5TDP6 509 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 FAM171A1Q5VUB5 890 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 NET1Q7Z628 596 aaPredicted RBP14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 BANPQ8N9N5 519 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 ZNF398Q8TD17 642 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 SPATA13Q96N96 652 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 KLHL5Q96PQ7 755 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 HAPLN3Q96S86 360 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 SPON2Q9BUD6 331 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 HSFX1Q9UBD0 423 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 COMMD10Q9Y6G5 202 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 SDR42E2A6NKP2 422 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 HAS3O00219 553 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 TPP1O14773 563 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 ZMPSTE24O75844 475 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 VCLP18206 1134 aa14.73□□□□□ -0.05
SHROOM1-208ENST00000617339 ARL1P40616 181 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms