RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 KCNK4Q9NYG8 393 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 UBP1Q9NZI7 540 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 IL1RAPL1Q9NZN1 696 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 MPP6Q9NZW5 540 aa16.01■□□□□ 0.15
NR1H3-235ENST00000616973 A0A0G2JND7 137 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 TIMM44O43615 452 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 FKTNO75072 461 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 IGLV3-27P01718 113 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 HAPLN1P10915 354 aaPredicted RBP16■□□□□ 0.15
NR1H3-235ENST00000616973 CPB1P15086 417 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 HADHAP40939 763 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 MTA1Q13330 715 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 CCDC91Q7Z6B0 441 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 CLNKQ7Z7G1 428 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 DCLK2Q8N568 766 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 SPATA22Q8NHS9 363 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 SKA1Q96BD8 255 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 ZNF419Q96HQ0 510 aaPredicted RBP16■□□□□ 0.15
NR1H3-235ENST00000616973 ZYG11BQ9C0D3 744 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 MRM3Q9HC36 420 aaKnown RBP16■□□□□ 0.15
NR1H3-235ENST00000616973 RBM22Q9NW64 420 aaKnown RBP eCLIP16■□□□□ 0.15
NR1H3-235ENST00000616973 MICAL3Q7RTP6 2002 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 CHD5Q8TDI0 1954 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 TRAFD1O14545 582 aaPredicted RBP16■□□□□ 0.15
NR1H3-235ENST00000616973 PROCP04070 461 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 MPOP05164 745 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 HLA-DQB2P05538 268 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 GALTP07902 379 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 T-ENOLP0DO92 83 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 TPH1P17752 444 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 NMBRP28336 390 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 GATMP50440 423 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 RASSF2P50749 326 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 EFEMP1Q12805 493 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 STX3Q13277 289 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 MPP3Q13368 585 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 HNRNPDQ14103 355 aaKnown RBP16■□□□□ 0.15
NR1H3-235ENST00000616973 SNCBQ16143 134 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 FASTKD1Q53R41 847 aaKnown RBP16■□□□□ 0.15
NR1H3-235ENST00000616973 TAF1BQ53T94 588 aaPredicted RBP16■□□□□ 0.15
NR1H3-235ENST00000616973 HSP90AA5PQ58FG0 334 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 CES4AQ5XG92 561 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 FAM91A1Q658Y4 838 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 DENND5AQ6IQ26 1287 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 PKN3Q6P5Z2 889 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 POTEHQ6S545 545 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 MTDHQ86UE4 582 aaKnown RBP16■□□□□ 0.15
NR1H3-235ENST00000616973 TMEM237Q96Q45 408 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 TUBB6Q9BUF5 446 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 SNX15Q9NRS6 342 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 C20orf96Q9NUD7 363 aaPredicted RBP16■□□□□ 0.15
NR1H3-235ENST00000616973 THAP1Q9NVV9 213 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 HEY2Q9UBP5 337 aa16■□□□□ 0.15
NR1H3-235ENST00000616973 IPO11Q9UI26 975 aaKnown RBP16■□□□□ 0.15
NR1H3-235ENST00000616973 VNN2O95498 520 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 TOP3BO95985 862 aaKnown RBP15.99■□□□□ 0.15
NR1H3-235ENST00000616973 MT-CYBP00156 380 aaPredicted RBP15.99■□□□□ 0.15
NR1H3-235ENST00000616973 PRKCGP05129 697 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 ZDHHC11BP0C7U3 371 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 RING1Q06587 406 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 TNK2Q07912 1038 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 CTC1Q2NKJ3 1217 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 CCDC153Q494R4 210 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 MBLAC2Q68D91 279 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 FSTL4Q6MZW2 842 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 ANKS3Q6ZW76 656 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 CRLF3Q8IUI8 442 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 MAGEC3Q8TD91 643 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 RAB3IPQ96QF0 476 aaPredicted RBP15.99■□□□□ 0.15
NR1H3-235ENST00000616973 AGAP2Q99490 1192 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 FICDQ9BVA6 458 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 MARCH2Q9P0N8 246 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 LNPEPQ9UIQ6 1025 aa15.99■□□□□ 0.15
NR1H3-235ENST00000616973 DRGXA6NNA5 263 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 PEX11BO96011 259 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 ATP5BP06576 529 aaKnown RBP15.98■□□□□ 0.15
NR1H3-235ENST00000616973 MYL2P10916 166 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 RPL10AP62906 217 aaKnown RBP15.98■□□□□ 0.15
NR1H3-235ENST00000616973 TAF10Q12962 218 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 C16orf46Q6P387 395 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 RSPO2Q6UXX9 243 aaPredicted RBP15.98■□□□□ 0.15
NR1H3-235ENST00000616973 RANBP10Q6VN20 620 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 RNF19BQ6ZMZ0 732 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 CNTN4Q8IWV2 1026 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 IPMKQ8NFU5 416 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 B3GALT6Q96L58 329 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 CEP295NLQ96MC4 621 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 SIKE1Q9BRV8 207 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 SLC25A51Q9H1U9 297 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 TRIM33Q9UPN9 1127 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 CCDC195A0A1B0GUA6 201 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 ATP6V1G2O95670 118 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 KRT16P08779 473 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 FGF3P11487 239 aaPredicted RBP15.98■□□□□ 0.15
NR1H3-235ENST00000616973 GRK2P25098 689 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 TARSP26639 723 aaKnown RBP15.98■□□□□ 0.15
NR1H3-235ENST00000616973 CSRP3P50461 194 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 RENBPP51606 427 aa15.98■□□□□ 0.15
NR1H3-235ENST00000616973 KPNA1P52294 538 aaPredicted RBP15.98■□□□□ 0.15
NR1H3-235ENST00000616973 ARPP19P56211 112 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms