RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 ALYREFQ86V81 257 aaKnown RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 C10orf107Q8IVU9 208 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 SPATA6LQ8N4H0 392 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 BANPQ8N9N5 519 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 SPATA22Q8NHS9 363 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 MRPS31Q92665 395 aaKnown RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 TUBGCP3Q96CW5 907 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 CATSPER2Q96P56 530 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 SLC9A7Q96T83 725 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 MRPL9Q9BYD2 267 aaKnown RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 TRIM54Q9BYV2 358 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 YIPF3Q9GZM5 350 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 POLR1EQ9GZS1 481 aaKnown RBP13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 ADAM7Q9H2U9 754 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 EFCAB1Q9HAE3 211 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 GLOD4Q9HC38 313 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 AURKCQ9UQB9 309 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 ATP11BQ9Y2G3 1177 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 RAD54BQ9Y620 910 aa13.41□□□□□ -0.26
PPP4R3B-206ENST00000616407 SF3B1O75533 1304 aaKnown RBP eCLIP13.4□□□□□ -0.262e-8■■■■■ 57.4
PPP4R3B-206ENST00000616407 ATXN2Q99700 1313 aaKnown RBP13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 CSH1P0DML2 217 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 CSH2P0DML3 217 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 PAX3P23760 479 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 WNT3AP56704 352 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 FLOT2Q14254 428 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 WASHC2DQ5SRD0 308 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 MPP5Q8N3R9 675 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 PQLC3Q8N755 202 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 OMDQ99983 421 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 APOL5Q9BWW9 433 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 UTP6Q9NYH9 597 aaKnown RBP13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 VPS26AO75436 327 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 SOAT2O75908 522 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 LRG1P02750 347 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 PIRTP0C851 137 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 PTPN3P26045 913 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 GRK4P32298 578 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 STX5Q13190 355 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 CYLC2Q14093 348 aaPredicted RBP13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 NCBP2-AS2Q69YL0 99 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 IFNLR1Q8IU57 520 aaPredicted RBP13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 PCYOX1LQ8NBM8 494 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 KCTD4Q8WVF5 259 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 SEMA3CQ99985 751 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 ACE2Q9BYF1 805 aaPredicted RBP13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 ADAMTS10Q9H324 1103 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 ADAM28Q9UKQ2 775 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 PIRO00625 290 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 SOCS7O14512 581 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 AP2A1O95782 977 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 C2P06681 752 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 NME5P56597 212 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 BNIP1Q12981 228 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 CAPRIN2Q6IMN6 1127 aaKnown RBP13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 C16orf59Q7L2K0 433 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 EMID1Q96A84 441 aaPredicted RBP13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 FGD4Q96M96 766 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 NDNQ99608 321 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 FTHL17Q9BXU8 183 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 FBXO5Q9UKT4 447 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 VPS9D1Q9Y2B5 631 aa13.4□□□□□ -0.26
PPP4R3B-206ENST00000616407 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 ZBTB42B2RXF5 422 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 AKT1P31749 480 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 CRHR1P34998 444 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 RGS4P49798 205 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 TAF10Q12962 218 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 DUSP4Q13115 394 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 DEFB115Q30KQ5 88 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 CLNKQ7Z7G1 428 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 SENP6Q9GZR1 1112 aaPredicted RBP13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 DRC3Q9H069 523 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 VCX3AQ9NNX9 186 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 MAN1C1Q9NR34 630 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 CRLS1Q9UJA2 301 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 ZNF180Q9UJW8 692 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 ANKRD6Q9Y2G4 727 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 UBR3Q6ZT12 1888 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 NRP1O14786 923 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 BIRC5O15392 142 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 TLR5O60602 858 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 PROCP04070 461 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 SCNN1AP37088 669 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 SOX4Q06945 474 aaPredicted RBP13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 C6orf10Q5SRN2 563 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 RSPH1Q8WYR4 309 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 RNF208Q9H0X6 261 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 SYTL2Q9HCH5 934 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 UBA2Q9UBT2 640 aaPredicted RBP13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 MFHAS1Q9Y4C4 1052 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 CA12O43570 354 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 ENTPD5O75356 428 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 EPHB3P54753 998 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 POU4F1Q01851 419 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 MED21Q13503 144 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 SEMA5AQ13591 1074 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 KCNJ11Q14654 390 aa13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 KPNB1Q14974 876 aaKnown RBP13.39□□□□□ -0.27
PPP4R3B-206ENST00000616407 UNC5BQ8IZJ1 945 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms