RNA–Protein interactions for RNA: ENST00000616136.1

EP400-209, Transcript of E1A binding protein p400, humanhuman

TSL 2

Gene EP400, Length 3,134 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EP400-209ENST00000616136 MMP3P08254 477 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 PTPN1P18031 435 aaKnown RBP12.9□□□□□ -0.34
EP400-209ENST00000616136 PGAM1P18669 254 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 TKTP29401 623 aaKnown RBP12.9□□□□□ -0.34
EP400-209ENST00000616136 SULT1E1P49888 294 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 NIPAL4Q0D2K0 466 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 RALGDSQ12967 914 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 ARL13AQ5H913 290 aaPredicted RBP12.9□□□□□ -0.34
EP400-209ENST00000616136 CATSPER4Q7RTX7 472 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 RNF168Q8IYW5 571 aaPredicted RBP12.9□□□□□ -0.34
EP400-209ENST00000616136 TTC39CQ8N584 583 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 SHCBP1Q8NEM2 672 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 QKIQ96PU8 341 aaKnown RBP eCLIP12.9□□□□□ -0.34
EP400-209ENST00000616136 VTA1Q9NP79 307 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 SBF1O95248 1867 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 CLDN5O00501 218 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 ACAT1P24752 427 aaKnown RBP12.9□□□□□ -0.34
EP400-209ENST00000616136 GP5P40197 560 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 PTPN9P43378 593 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 GRIA4P48058 902 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 NDUFV1P49821 464 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 PRAMEP78395 509 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 CBLBQ13191 982 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 SEMA5AQ13591 1074 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 CEACAM7Q14002 265 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 MYLK3Q32MK0 819 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 DCAF4L1Q3SXM0 396 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 RARS2Q5T160 578 aaKnown RBP12.9□□□□□ -0.34
EP400-209ENST00000616136 SLC26A9Q7LBE3 791 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 DEFB106AQ8N104 65 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 KYQ8NBH2 561 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 GPRC5AQ8NFJ5 357 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 SLC2A14Q8TDB8 520 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 CENPIQ92674 756 aaPredicted RBP12.9□□□□□ -0.34
EP400-209ENST00000616136 EME1Q96AY2 570 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 NMRAL1Q9HBL8 299 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 DNAJB4Q9UDY4 337 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 SNX10Q9Y5X0 201 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 CDY2AQ9Y6F7 541 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 CDY1Q9Y6F8 540 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 USP3Q9Y6I4 520 aa12.9□□□□□ -0.34
EP400-209ENST00000616136 VILLO15195 856 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 SMIM18P0DKX4 95 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 CYLC2Q14093 348 aaPredicted RBP12.89□□□□□ -0.35
EP400-209ENST00000616136 HNRNPDQ14103 355 aaKnown RBP12.89□□□□□ -0.35
EP400-209ENST00000616136 MAP3K21Q5TCX8 1036 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 ARHGAP17Q68EM7 881 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 BNC2Q6ZN30 1099 aaPredicted RBP12.89□□□□□ -0.35
EP400-209ENST00000616136 TRIM67Q6ZTA4 783 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 JADE3Q92613 823 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 EMID1Q96A84 441 aaPredicted RBP12.89□□□□□ -0.35
EP400-209ENST00000616136 APBA2Q99767 749 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 CYP4F12Q9HCS2 524 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 DNAJC28Q9NX36 388 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 CACNG4Q9UBN1 327 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 ZDHHC2Q9UIJ5 367 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 RBM47A0AV96 593 aaKnown RBP12.89□□□□□ -0.35
EP400-209ENST00000616136 FOXD2O60548 495 aaPredicted RBP12.89□□□□□ -0.35
EP400-209ENST00000616136 GPR32O75388 356 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 HNRNPLP14866 589 aaKnown RBP eCLIP12.89□□□□□ -0.35
EP400-209ENST00000616136 TPSB2P20231 275 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 RGS2P41220 211 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 GARSP41250 739 aaKnown RBP12.89□□□□□ -0.35
EP400-209ENST00000616136 DPP6P42658 865 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 PLK1P53350 603 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 NME5P56597 212 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 BST2Q10589 180 aaKnown RBP12.89□□□□□ -0.35
EP400-209ENST00000616136 TPSAB1Q15661 275 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 PITRM1Q5JRX3 1037 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 ZNF280DQ6N043 979 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 DUS1LQ6P1R4 473 aaKnown RBP12.89□□□□□ -0.35
EP400-209ENST00000616136 SLC27A1Q6PCB7 646 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 ZNF410Q86VK4 478 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 BEST2Q8NFU1 509 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 URGCPQ8TCY9 931 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 ATP6V1E2Q96A05 226 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 TMIGD2Q96BF3 282 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 PPWD1Q96BP3 646 aaKnown RBP12.89□□□□□ -0.35
EP400-209ENST00000616136 HSPBAP1Q96EW2 488 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 ILKAPQ9H0C8 392 aaPredicted RBP12.89□□□□□ -0.35
EP400-209ENST00000616136 RNF39Q9H2S5 420 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 CAAP1Q9H8G2 361 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 SORCS3Q9UPU3 1222 aa12.89□□□□□ -0.35
EP400-209ENST00000616136 NEMP2A6NFY4 417 aa12.88□□□□□ -0.35
EP400-209ENST00000616136 FAM72CH0Y354 149 aa12.88□□□□□ -0.35
EP400-209ENST00000616136 TRIM13O60858 407 aa12.88□□□□□ -0.35
EP400-209ENST00000616136 TSPAN8P19075 237 aa12.88□□□□□ -0.35
EP400-209ENST00000616136 IGFBP6P24592 240 aaPredicted RBP12.88□□□□□ -0.35
EP400-209ENST00000616136 ETFBP38117 255 aa12.88□□□□□ -0.35
EP400-209ENST00000616136 SOX4Q06945 474 aaPredicted RBP12.88□□□□□ -0.35
EP400-209ENST00000616136 CBX3Q13185 183 aa12.88□□□□□ -0.35
EP400-209ENST00000616136 SNAPC2Q13487 334 aa12.88□□□□□ -0.35
EP400-209ENST00000616136 FAM72AQ5TYM5 149 aa12.88□□□□□ -0.35
EP400-209ENST00000616136 FAM72DQ6L9T8 149 aa12.88□□□□□ -0.35
EP400-209ENST00000616136 EPGNQ6UW88 154 aa12.88□□□□□ -0.35
EP400-209ENST00000616136 FAM72BQ86X60 149 aa12.88□□□□□ -0.35
EP400-209ENST00000616136 ANKRD52Q8NB46 1076 aa12.88□□□□□ -0.35
EP400-209ENST00000616136 KCTD4Q8WVF5 259 aa12.88□□□□□ -0.35
EP400-209ENST00000616136 DGCR14Q96DF8 476 aaKnown RBP12.88□□□□□ -0.35
EP400-209ENST00000616136 CELF6Q96J87 481 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms