RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CERCAMQ5T4B2 595 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 THOC7Q6I9Y2 204 aaKnown RBP13.39□□□□□ -0.27
MSH6-214ENST00000616033 SNX29P2Q8IUI4 249 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 CATSPER1Q8NEC5 780 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 HTR3CQ8WXA8 447 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 FRMD8P1Q9BZ68 369 aaPredicted RBP13.39□□□□□ -0.27
MSH6-214ENST00000616033 AP4E1Q9UPM8 1137 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 PCDHB12Q9Y5F1 795 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 GMEB1Q9Y692 573 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 C2CD4BA6NLJ0 364 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 KPNA7A9QM74 516 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 PSME3P61289 254 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 PIGGQ5H8A4 983 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 ZNF280DQ6N043 979 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 SAMD7Q7Z3H4 446 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 CERS2Q96G23 380 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 OSBPL6Q9BZF3 934 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 ZNF696Q9H7X3 374 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 RPF1Q9H9Y2 349 aaKnown RBP13.39□□□□□ -0.27
MSH6-214ENST00000616033 GGA3Q9NZ52 723 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 MOSPD1Q9UJG1 213 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 CNTN6Q9UQ52 1028 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 UBR3Q6ZT12 1888 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 OGTO15294 1046 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 POLBP06746 335 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 CD247P20963 164 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 TGM2P21980 687 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 GP5P40197 560 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 GPD2P43304 727 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 RPL14P50914 215 aaKnown RBP13.38□□□□□ -0.27
MSH6-214ENST00000616033 C21orf59P57076 290 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 IKBKEQ14164 716 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 PERM1Q5SV97 790 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 ERI1Q8IV48 349 aaKnown RBP13.38□□□□□ -0.27
MSH6-214ENST00000616033 NIM1KQ8IY84 436 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 CCDC185Q8N715 623 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 CPB2Q96IY4 423 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 ACE2Q9BYF1 805 aaPredicted RBP13.38□□□□□ -0.27
MSH6-214ENST00000616033 XYLT2Q9H1B5 865 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 BCAP29Q9UHQ4 241 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 HDAC3O15379 428 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 SUPT20HL2P0C7V6 817 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 BAG6P46379 1132 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 RABGGTBP53611 331 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 SUPT20HL1Q3ZLR7 823 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 DCAF6Q58WW2 860 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 URGCPQ8TCY9 931 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 NSUN6Q8TEA1 469 aaKnown RBP13.38□□□□□ -0.27
MSH6-214ENST00000616033 ARPC5LQ9BPX5 153 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 HEPHQ9BQS7 1158 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 POLR1BQ9H9Y6 1135 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 PLGRKTQ9HBL7 147 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 SLC38A10Q9HBR0 1119 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 MOCS1Q9NZB8 636 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 CIDEBQ9UHD4 219 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 PCDHGC3Q9UN70 934 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 EIF3FO00303 357 aaPredicted RBP13.38□□□□□ -0.27
MSH6-214ENST00000616033 FBP2O00757 339 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 ATE1O95260 518 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 PPARGP37231 505 aaPredicted RBP13.38□□□□□ -0.27
MSH6-214ENST00000616033 CLCN3P51790 818 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 PPP1R3AQ16821 1122 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 CYP4V2Q6ZWL3 525 aaPredicted RBP13.38□□□□□ -0.27
MSH6-214ENST00000616033 NIPA1Q7RTP0 329 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 CBR4Q8N4T8 237 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 PPP1R13LQ8WUF5 828 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 CNDP1Q96KN2 507 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 SLX1AQ9BQ83 275 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 CHRAC1Q9NRG0 131 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 SACM1LQ9NTJ5 587 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 COQ6Q9Y2Z9 468 aa13.38□□□□□ -0.27
MSH6-214ENST00000616033 COPG1Q9Y678 874 aaKnown RBP13.38□□□□□ -0.27
MSH6-214ENST00000616033 NUP205Q92621 2012 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 K7EPI3 171 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 SOCS2O14508 198 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 ZNF182P17025 639 aaPredicted RBP13.37□□□□□ -0.27
MSH6-214ENST00000616033 GSTM4Q03013 218 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 ZIK1Q3SY52 487 aaPredicted RBP13.37□□□□□ -0.27
MSH6-214ENST00000616033 BOLA3Q53S33 107 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 ABHD15Q6UXT9 468 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 DLK2Q6UY11 383 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 C1orf127Q8N9H9 656 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 DDHD1Q8NEL9 900 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 CANT1Q8WVQ1 401 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 FAM151AQ8WW52 585 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 ISOC1Q96CN7 298 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 PHF21BQ96EK2 531 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 FBXL20Q96IG2 436 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 EPB41L1Q9H4G0 881 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 DTLQ9NZJ0 730 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 COL24A1Q17RW2 1714 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 AGRPO00253 132 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 HOXC6P09630 235 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 UGT1A1P22309 533 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 UGT1A4P22310 534 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 SPRP35270 261 aaPredicted RBP13.37□□□□□ -0.27
MSH6-214ENST00000616033 UGT1A3P35503 534 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 UGT1A5P35504 534 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 CXCL9Q07325 125 aa13.37□□□□□ -0.27
MSH6-214ENST00000616033 PPP1R26Q5T8A7 1209 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms