RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 ZNF567Q8N184 647 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 ASAP3Q8TDY4 903 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 ATXN7L3BQ96GX2 97 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 ZBTB11O95625 1053 aaPredicted RBP9.4□□□□□ -0.9
COL12A1-211ENST00000615798 GZMAP12544 262 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 ALAS1P13196 640 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 VAMP7P51809 220 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 YTHDF3Q7Z739 585 aaKnown RBP9.4□□□□□ -0.9
COL12A1-211ENST00000615798 ZNF333Q96JL9 665 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 SAR1AQ9NR31 198 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.4□□□□□ -0.9
COL12A1-211ENST00000615798 SEC14L4Q9UDX3 406 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 PLEKHA6Q9Y2H5 1048 aa9.4□□□□□ -0.9
COL12A1-211ENST00000615798 CCDC85CA6NKD9 419 aa9.4□□□□□ -0.91
COL12A1-211ENST00000615798 PSMG1O95456 288 aa9.4□□□□□ -0.91
COL12A1-211ENST00000615798 PRR29P0C7W0 189 aa9.4□□□□□ -0.91
COL12A1-211ENST00000615798 TCF7P36402 384 aaPredicted RBP9.4□□□□□ -0.91
COL12A1-211ENST00000615798 LONRF1Q17RB8 773 aa9.4□□□□□ -0.91
COL12A1-211ENST00000615798 ACBD4Q8NC06 268 aa9.4□□□□□ -0.91
COL12A1-211ENST00000615798 SLC22A8Q8TCC7 542 aa9.4□□□□□ -0.91
COL12A1-211ENST00000615798 GANCQ8TET4 914 aa9.4□□□□□ -0.91
COL12A1-211ENST00000615798 CFAP97Q9P2B7 532 aa9.4□□□□□ -0.91
COL12A1-211ENST00000615798 UBA1P22314 1058 aaKnown RBP9.4□□□□□ -0.91
COL12A1-211ENST00000615798 SUPT20HL1Q3ZLR7 823 aa9.4□□□□□ -0.91
COL12A1-211ENST00000615798 GPR107Q5VW38 600 aa9.4□□□□□ -0.91
COL12A1-211ENST00000615798 ITCHQ96J02 903 aa9.4□□□□□ -0.91
COL12A1-211ENST00000615798 ZIM3Q96PE6 472 aa9.4□□□□□ -0.91
COL12A1-211ENST00000615798 TRIT1Q9H3H1 467 aaKnown RBP9.4□□□□□ -0.91
COL12A1-211ENST00000615798 KCTD5Q9NXV2 234 aa9.4□□□□□ -0.91
COL12A1-211ENST00000615798 RUVBL1Q9Y265 456 aaKnown RBP9.4□□□□□ -0.91
COL12A1-211ENST00000615798 CRYZL1O95825 349 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 C12orf43Q96C57 262 aaKnown RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 DDX47Q9H0S4 455 aaKnown RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 ADAM22Q9P0K1 906 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 CNOT8Q9UFF9 292 aaKnown RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 RAB26Q9ULW5 256 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 GABBR2O75899 941 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 HIST1H2AGP0C0S8 130 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 HIST1H2ADP20671 130 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 SLC2A5P22732 501 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 LRRC41Q15345 812 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 ZDHHC13Q8IUH4 622 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 HIST1H2AHQ96KK5 128 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 HIST1H2AJQ99878 128 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 H2AFJQ9BTM1 129 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 PTDSS1P48651 473 aaKnown RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 KIZQ2M2Z5 673 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 OR6B2Q6IFH4 312 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 KCTD1Q719H9 257 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 ZZZ3Q8IYH5 903 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 AADATQ8N5Z0 425 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 PPP1R10Q96QC0 940 aaKnown RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 WFS1O76024 890 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 CSPG5O95196 566 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 RPL35P42766 123 aaKnown RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 FXR1P51114 621 aaKnown RBP eCLIP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 MTMR4Q9NYA4 1195 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 PTTG2Q9NZH5 202 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 STARD13Q9Y3M8 1113 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 ENTPD3O75355 529 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 RPS6KA5O75582 802 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 NFE2L1Q14494 772 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 INO80DQ53TQ3 878 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 GTF2IRD2BQ6EKJ0 949 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 GTF2IRD2Q86UP8 949 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 ING5Q8WYH8 240 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 PGBD4Q96DM1 585 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 TMEM120AQ9BXJ8 343 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 OXCT2Q9BYC2 517 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 SLC7A5P2Q9GIP4 190 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 TM9SF3Q9HD45 589 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 TOR4AQ9NXH8 423 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 ARL5AQ9Y689 179 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 PDE2AO00408 941 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 TRMUO75648 421 aaKnown RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 GRK4P32298 578 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 RGS8P57771 180 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 POU4F1Q01851 419 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 SGO1Q5FBB7 561 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 LRIF1Q5T3J3 769 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 HIPK1Q86Z02 1210 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 PHC3Q8NDX5 983 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 THRSPQ92748 146 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 GPRASP2Q96D09 838 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 GMCL1Q96IK5 515 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 RBM15Q96T37 977 aaKnown RBP eCLIP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 INO80BQ9C086 356 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 PAK6Q9NQU5 681 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 GNG13Q9P2W3 67 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 PVALBP20472 110 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 PRDX5P30044 214 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 SEC24CP53992 1094 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 GEMIN4P57678 1058 aaKnown RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 MTA1Q13330 715 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 REEP1Q9H902 201 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 SEPT9Q9UHD8 586 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-211ENST00000615798 ZNF639Q9UID6 485 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 SHOC2Q9UQ13 582 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 INPP4BO15327 924 aa9.39□□□□□ -0.91
COL12A1-211ENST00000615798 SRCP12931 536 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms