RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 C20orf96Q9NUD7 363 aaPredicted RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 TRPM5Q9NZQ8 1165 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 IGSF9Q9P2J2 1179 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 AFF4Q9UHB7 1163 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 DCTN4Q9UJW0 460 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 DNMT3LQ9UJW3 386 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 RRP15Q9Y3B9 282 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 CHD9Q3L8U1 2897 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ABHD14A-ACY1A0A1B0GW23 586 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 C2orf71A6NGG8 1288 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 HIDE1A8MVS5 230 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 GRXCR1A8MXD5 290 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 F5H5T6 163 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 SMAPO00193 183 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 COPEO14579 308 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 PER2O15055 1255 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 MUSKO15146 869 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 MATN3O15232 486 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 RFPL2O75678 378 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 KRT37O76014 449 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 VAPBO95292 243 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 POLBP06746 335 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 SNRPAP09012 282 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 KITP10721 976 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 SLC2A3P11169 496 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 MYL4P12829 197 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 BMP1P13497 986 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 TAC1P20366 129 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 PAX3P23760 479 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 CCNCP24863 283 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 GABRR2P28476 465 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 MAGEA3P43357 314 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ERVFC1P60507 584 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 SMAD3P84022 425 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 ZXDBP98169 803 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 IL9RQ01113 521 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 NIPAL4Q0D2K0 466 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 CNGA3Q16281 694 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 EML3Q32P44 896 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 FAM133BQ5BKY9 247 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 MANEALQ5VSG8 457 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 MARC1Q5VT66 337 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 PLPP4Q5VZY2 271 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ITPRIPL1Q6GPH6 555 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 ESRP1Q6NXG1 681 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 STRA8Q7Z7C7 330 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 C7orf61Q8IZ16 206 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 CARNMT1Q8N4J0 409 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 TMEM199Q8N511 208 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 OTUD6BQ8N6M0 293 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 LRRC8CQ8TDW0 803 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 CKAP2Q8WWK9 683 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 PTPRN2Q92932 1015 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 UBE2OQ9C0C9 1292 aaKnown RBP3.5□□□□□ -1.85
LIG4-205ENST00000614526 HCFC1R1Q9NWW0 138 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 CLIC5Q9NZA1 410 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 PRKAG2Q9UGJ0 569 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 KCTD3Q9Y597 815 aa3.5□□□□□ -1.85
LIG4-205ENST00000614526 A0A1W2PRU2 124 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 OR51F1A6NGY5 319 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 TPP1O14773 563 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 CCL16O15467 120 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 FGF10O15520 208 aaPredicted RBP3.49□□□□□ -1.85
LIG4-205ENST00000614526 TGM5O43548 720 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 TYROBPO43914 113 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 ACSL4O60488 711 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 SNAP91O60641 907 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 ASMTLO95671 621 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 CKMP06732 381 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 HSPA8P11142 646 aaKnown RBP3.49□□□□□ -1.85
LIG4-205ENST00000614526 RHOQP17081 205 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 HDCP19113 662 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 BGNP21810 368 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 MAGEA6P43360 314 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 SCNN1BP51168 640 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 WNT3AP56704 352 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 COG7P83436 770 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 GALNT3Q14435 633 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 VEPH1Q14D04 833 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 ANKRD20A4Q4UJ75 823 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 TTC39BQ5VTQ0 682 aaPredicted RBP3.49□□□□□ -1.85
LIG4-205ENST00000614526 MSANTD2Q6P1R3 559 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 TDRPQ86YL5 185 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 DENND6AQ8IWF6 608 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 SCML4Q8N228 414 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 RIBC1Q8N443 379 aaPredicted RBP3.49□□□□□ -1.85
LIG4-205ENST00000614526 PAF1Q8N7H5 531 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 BANPQ8N9N5 519 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 OR6K2Q8NGY2 324 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 MZB1Q8WU39 189 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 MYLIPQ8WY64 445 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 CERS2Q96G23 380 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 SRPK1Q96SB4 655 aaKnown RBP3.49□□□□□ -1.85
LIG4-205ENST00000614526 SEMA3CQ99985 751 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 TBL1YQ9BQ87 522 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 CORO1BQ9BR76 489 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 SUDS3Q9H7L9 328 aaPredicted RBP3.49□□□□□ -1.85
LIG4-205ENST00000614526 IL37Q9NZH6 218 aa3.49□□□□□ -1.85
LIG4-205ENST00000614526 MARCOQ9UEW3 520 aaPredicted RBP3.49□□□□□ -1.85
LIG4-205ENST00000614526 TRHDEQ9UKU6 1024 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms