RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 PSTKQ8IV42 348 aaKnown RBP16.81■□□□□ 0.28
CNOT3-208ENST00000613073 RNF168Q8IYW5 571 aaPredicted RBP16.81■□□□□ 0.28
CNOT3-208ENST00000613073 BANPQ8N9N5 519 aa16.81■□□□□ 0.28
CNOT3-208ENST00000613073 SLC44A1Q8WWI5 657 aa16.81■□□□□ 0.28
CNOT3-208ENST00000613073 RSPH1Q8WYR4 309 aa16.81■□□□□ 0.28
CNOT3-208ENST00000613073 PGBD4Q96DM1 585 aa16.81■□□□□ 0.28
CNOT3-208ENST00000613073 SPATA13Q96N96 652 aa16.81■□□□□ 0.28
CNOT3-208ENST00000613073 ACBD6Q9BR61 282 aa16.81■□□□□ 0.28
CNOT3-208ENST00000613073 VPS11Q9H270 941 aa16.81■□□□□ 0.28
CNOT3-208ENST00000613073 UGT1A7Q9HAW7 530 aa16.81■□□□□ 0.28
CNOT3-208ENST00000613073 UGT1A10Q9HAW8 530 aa16.81■□□□□ 0.28
CNOT3-208ENST00000613073 UGT1A8Q9HAW9 530 aa16.81■□□□□ 0.28
CNOT3-208ENST00000613073 MRPL42Q9Y6G3 142 aaKnown RBP16.81■□□□□ 0.28
CNOT3-208ENST00000613073 TTC3P53804 2025 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 B4GALT3O60512 393 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 ALDH1A1P00352 501 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 MT-ND3P03897 115 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 OR4Q2P0C623 313 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 MAGEA6P43360 314 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 CHN2P52757 468 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 DPYSQ14117 519 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 TRIM71Q2Q1W2 868 aaKnown RBP16.8■□□□□ 0.28
CNOT3-208ENST00000613073 RALGPS1Q5JS13 557 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 CASC4Q6P4E1 433 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 TRMT10BQ6PF06 316 aaKnown RBP16.8■□□□□ 0.28
CNOT3-208ENST00000613073 UNC5AQ6ZN44 842 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 RNF180Q86T96 592 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 ZNF280BQ86YH2 543 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 DEPDC1BQ8WUY9 529 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 SERAC1Q96JX3 654 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 COLEC11Q9BWP8 271 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 KLHL4Q9C0H6 718 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 FBXW11Q9UKB1 542 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 NUP205Q92621 2012 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 SMIM18P0DKX4 95 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 TPI1P60174 286 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 MTA1Q13330 715 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 HSF5Q4G112 596 aaPredicted RBP16.8■□□□□ 0.28
CNOT3-208ENST00000613073 FAM171BQ6P995 826 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 METTL25Q8N6Q8 603 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 RNF34Q969K3 372 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 SIGLEC10Q96LC7 697 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 TKTL2Q9H0I9 626 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 WDCPQ9H6R7 721 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 SMYD2Q9NRG4 433 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 APPL1Q9UKG1 709 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 TSC2P49815 1807 aa16.8■□□□□ 0.28
CNOT3-208ENST00000613073 CAPN8A6NHC0 703 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 ATP9BO43861 1147 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 CLPTM1O96005 669 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 TSHRP16473 764 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 SH3BGRP55822 239 aaPredicted RBP16.79■□□□□ 0.28
CNOT3-208ENST00000613073 TMEM259Q4ZIN3 620 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 RTN4RL1Q86UN2 441 aaPredicted RBP16.79■□□□□ 0.28
CNOT3-208ENST00000613073 MCUQ8NE86 351 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 CD99L2Q8TCZ2 262 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 FRMD8Q9BZ67 464 aaPredicted RBP16.79■□□□□ 0.28
CNOT3-208ENST00000613073 CSNK1G1Q9HCP0 422 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 IQANK1A0A1B0GTG1 560 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 HACD1B0YJ81 288 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 DCLK1O15075 740 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 RPLP2P05387 115 aaKnown RBP16.79■□□□□ 0.28
CNOT3-208ENST00000613073 TFAP2AP05549 437 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 CKBP12277 381 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 PSMB4P28070 264 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 AQP5P55064 265 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 SESN2P58004 480 aaPredicted RBP16.79■□□□□ 0.28
CNOT3-208ENST00000613073 OLIG2Q13516 323 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 SEMA5AQ13591 1074 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 PDK1Q15118 436 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 RABGAP1LQ5R372 815 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 LRRC8BQ6P9F7 803 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 UNC5BQ8IZJ1 945 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 PIP4K2CQ8TBX8 421 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 PRICKLE1Q96MT3 831 aaPredicted RBP16.79■□□□□ 0.28
CNOT3-208ENST00000613073 TAGLN3Q9UI15 199 aa16.79■□□□□ 0.28
CNOT3-208ENST00000613073 MKI67P46013 3256 aaKnown RBP16.79■□□□□ 0.28
CNOT3-208ENST00000613073 CAPN14A8MX76 684 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 SPAG6O75602 509 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 C1QAP02745 245 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 TPSB2P20231 275 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 CST5P28325 142 aaPredicted RBP16.78■□□□□ 0.28
CNOT3-208ENST00000613073 FOLH1Q04609 750 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 CYLC2Q14093 348 aaPredicted RBP16.78■□□□□ 0.28
CNOT3-208ENST00000613073 HNRNPDQ14103 355 aaKnown RBP16.78■□□□□ 0.28
CNOT3-208ENST00000613073 TPSAB1Q15661 275 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 IYDQ6PHW0 289 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 UGT2A3Q6UWM9 527 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 C4orf22Q6V702 233 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 PID1Q7Z2X4 250 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 TAC4Q86UU9 113 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 ZNF567Q8N184 647 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 NPWQ8N729 165 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 ZFP28Q8NHY6 868 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 AGAP3Q96P47 875 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 NUDT5Q9UKK9 219 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 WDR27A2RRH5 827 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 TM9SF1O15321 606 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 TRPA1O75762 1119 aa16.78■□□□□ 0.28
CNOT3-208ENST00000613073 TOMM70O94826 608 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms