RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 USP39Q53GS9 565 aaKnown RBP14.56□□□□□ -0.08
CTSA-219ENST00000607841 AFMIDQ63HM1 303 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 LINGO4Q6UY18 593 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 PEX26Q7Z412 305 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 TMPRSS6Q8IU80 811 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 LRRC49Q8IUZ0 686 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 KATNAL2Q8IYT4 538 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 RCOR2Q8IZ40 523 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 ZNF366Q8N895 744 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 LRRC57Q8N9N7 239 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 ZBTB44Q8NCP5 570 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 MDGA1Q8NFP4 955 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 PCDH19Q8TAB3 1148 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 FRS2Q8WU20 508 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 PRCCQ92733 491 aaPredicted RBP14.56□□□□□ -0.08
CTSA-219ENST00000607841 RNF25Q96BH1 459 aaPredicted RBP14.56□□□□□ -0.08
CTSA-219ENST00000607841 RBM41Q96IZ5 413 aaKnown RBP14.56□□□□□ -0.08
CTSA-219ENST00000607841 RNF157Q96PX1 679 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 KLC2Q9H0B6 622 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 CD248Q9HCU0 757 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 PCDHA3Q9Y5H8 950 aa14.56□□□□□ -0.08
CTSA-219ENST00000607841 A0A0U1RQJ8 604 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 MIF4GDA9UHW6 222 aaKnown RBP14.55□□□□□ -0.08
CTSA-219ENST00000607841 DFFAO00273 331 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 SIN3BO75182 1162 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 ZNF217O75362 1048 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 MT-CO1P00395 513 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 ACADMP11310 421 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 CTNNA1P35221 906 aaKnown RBP14.55□□□□□ -0.08
CTSA-219ENST00000607841 CETN2P41208 172 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 RECQLP46063 649 aaPredicted RBP14.55□□□□□ -0.08
CTSA-219ENST00000607841 ZBTB16Q05516 673 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 DMWDQ09019 674 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 SFSWAPQ12872 951 aaKnown RBP14.55□□□□□ -0.08
CTSA-219ENST00000607841 ELAVL3Q14576 367 aaKnown RBP14.55□□□□□ -0.08
CTSA-219ENST00000607841 PAFAH1B3Q15102 231 aaKnown RBP14.55□□□□□ -0.08
CTSA-219ENST00000607841 INO80DQ53TQ3 878 aaPredicted RBP14.55□□□□□ -0.08
CTSA-219ENST00000607841 C9orf64Q5T6V5 341 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 DSG4Q86SJ6 1040 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 ARHGAP12Q8IWW6 846 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 PCDH20Q8N6Y1 951 aaKnown RBP14.55□□□□□ -0.08
CTSA-219ENST00000607841 NPWQ8N729 165 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 UBL4BQ8N7F7 174 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 EXD1Q8NHP7 514 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 PTPRN2Q92932 1015 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 ISG20Q96AZ6 181 aaKnown RBP14.55□□□□□ -0.08
CTSA-219ENST00000607841 SIPA1Q96FS4 1042 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 MRGPRX1Q96LB2 322 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 ALS2CR12Q96Q35 445 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 SP110Q9HB58 689 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 LZTFL1Q9NQ48 299 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 ETNK2Q9NVF9 386 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 PPP2R2CQ9Y2T4 447 aa14.55□□□□□ -0.08
CTSA-219ENST00000607841 C3orf70A6NLC5 250 aaPredicted RBP14.54□□□□□ -0.08
CTSA-219ENST00000607841 K7ERQ8 282 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 APOL1O14791 398 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 ZSCAN12O43309 604 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 NDUFV2P19404 249 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 MX2P20592 715 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 CTNNA2P26232 953 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 COPAP53621 1224 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 RWDD2BP57060 319 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 IL10RBQ08334 325 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 TFDP2Q14188 446 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 ZNF776Q68DI1 518 aaPredicted RBP14.54□□□□□ -0.08
CTSA-219ENST00000607841 NCBP2-AS2Q69YL0 99 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 KIAA1324Q6UXG2 1013 aaKnown RBP14.54□□□□□ -0.08
CTSA-219ENST00000607841 NT5DC3Q86UY8 548 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 C11orf74Q86VG3 221 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 RFX6Q8HWS3 928 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 CCDC50Q8IVM0 306 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 OR8D1Q8WZ84 308 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 ERLEC1Q96DZ1 483 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 SPACA7Q96KW9 195 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 ZNF830Q96NB3 372 aaPredicted RBP14.54□□□□□ -0.08
CTSA-219ENST00000607841 TPSD1Q9BZJ3 242 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 MKRN2Q9H000 416 aaKnown RBP14.54□□□□□ -0.08
CTSA-219ENST00000607841 RSPH9Q9H1X1 276 aaPredicted RBP14.54□□□□□ -0.08
CTSA-219ENST00000607841 UBA2Q9UBT2 640 aaPredicted RBP14.54□□□□□ -0.08
CTSA-219ENST00000607841 IPO11Q9UI26 975 aaKnown RBP14.54□□□□□ -0.08
CTSA-219ENST00000607841 SCML1Q9UN30 329 aa14.54□□□□□ -0.08
CTSA-219ENST00000607841 MCF2LO15068 1137 aa14.53□□□□□ -0.08
CTSA-219ENST00000607841 ALOX15BO15296 676 aa14.53□□□□□ -0.08
CTSA-219ENST00000607841 SMAD6O43541 496 aaKnown RBP14.53□□□□□ -0.08
CTSA-219ENST00000607841 PRAMEF11O60813 436 aa14.53□□□□□ -0.08
CTSA-219ENST00000607841 LILRB5O75023 590 aa14.53□□□□□ -0.08
CTSA-219ENST00000607841 DNTTP04053 509 aa14.53□□□□□ -0.08
CTSA-219ENST00000607841 C7P10643 843 aa14.53□□□□□ -0.08
CTSA-219ENST00000607841 CDKN2BP42772 138 aa14.53□□□□□ -0.08
CTSA-219ENST00000607841 COPS2P61201 443 aa14.53□□□□□ -0.08
CTSA-219ENST00000607841 RFTN1Q14699 578 aaPredicted RBP14.53□□□□□ -0.08
CTSA-219ENST00000607841 TFDP3Q5H9I0 405 aa14.53□□□□□ -0.08
CTSA-219ENST00000607841 TMCO4Q5TGY1 634 aa14.53□□□□□ -0.08
CTSA-219ENST00000607841 C22orf39Q6P5X5 142 aa14.53□□□□□ -0.08
CTSA-219ENST00000607841 MFSD7Q6UXD7 560 aa14.53□□□□□ -0.08
CTSA-219ENST00000607841 SPOCD1Q6ZMY3 1216 aa14.53□□□□□ -0.08
CTSA-219ENST00000607841 Q6ZVU0 165 aa14.53□□□□□ -0.08
CTSA-219ENST00000607841 BZW1Q7L1Q6 419 aaKnown RBP14.53□□□□□ -0.08
CTSA-219ENST00000607841 PLPP6Q8IY26 295 aa14.53□□□□□ -0.08
CTSA-219ENST00000607841 ATPAF2Q8N5M1 289 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms