RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 PRAMEF26H0Y7S4 382 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 GOLGA8SH3BPF8 625 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 RNF103O00237 685 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 CBX4O00257 560 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 ENC1O14682 589 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 YKT6O15498 198 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 SMAD6O43541 496 aaKnown RBP7.8□□□□□ -1.16
CUX1-219ENST00000606749 MAGEC1O60732 1142 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 ZNF821O75541 412 aaPredicted RBP7.8□□□□□ -1.16
CUX1-219ENST00000606749 ENDOD1O94919 500 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 LSM8O95777 96 aaKnown RBP7.8□□□□□ -1.16
CUX1-219ENST00000606749 GLDCP23378 1020 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 RRM1P23921 792 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 EEF1GP26641 437 aaKnown RBP7.8□□□□□ -1.16
CUX1-219ENST00000606749 CHRNA3P32297 505 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 ARRB1P49407 418 aaPredicted RBP7.8□□□□□ -1.16
CUX1-219ENST00000606749 NOMO3P69849 1222 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 SLC20A2Q08357 652 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 OVGP1Q12889 678 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 CAMK2BQ13554 666 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 STAT4Q14765 748 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 SMAD1Q15797 465 aaKnown RBP7.8□□□□□ -1.16
CUX1-219ENST00000606749 CCDC157Q569K6 752 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 ARSIQ5FYB1 569 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 C6orf118Q5T5N4 469 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 PIP5KL1Q5T9C9 394 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 NAA35Q5VZE5 725 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 NEK5Q6P3R8 708 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 DHRS13Q6UX07 377 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 CLEC17AQ6ZS10 378 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 KANSL1Q7Z3B3 1105 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 TFAP2DQ7Z6R9 452 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 IQCHQ86VS3 1027 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 EID2Q8N6I1 236 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 DCAF4L2Q8NA75 395 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 MSANTD4Q8NCY6 345 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 OR7D4Q8NG98 312 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 MDM1Q8TC05 714 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 ENOX1Q8TC92 643 aaKnown RBP7.8□□□□□ -1.16
CUX1-219ENST00000606749 EPS8L1Q8TE68 723 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 TSC1Q92574 1164 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 CNDP2Q96KP4 475 aaKnown RBP7.8□□□□□ -1.16
CUX1-219ENST00000606749 CFAP57Q96MR6 1250 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 C2orf49Q9BVC5 232 aaPredicted RBP7.8□□□□□ -1.16
CUX1-219ENST00000606749 GANQ9H2C0 597 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 PREBQ9HCU5 417 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 LMBRD1Q9NUN5 540 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 TAB2Q9NYJ8 693 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 DKK4Q9UBT3 224 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 ZNF212Q9UDV6 495 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 GPSM3Q9Y4H4 160 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 PCDHGA1Q9Y5H4 931 aa7.8□□□□□ -1.16
CUX1-219ENST00000606749 DOCK9Q9BZ29 2069 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 KPNA3O00505 521 aaPredicted RBP7.79□□□□□ -1.16
CUX1-219ENST00000606749 SLC31A1O15431 190 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 RNGTTO60942 597 aaKnown RBP7.79□□□□□ -1.16
CUX1-219ENST00000606749 ZMPSTE24O75844 475 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 GFPT2O94808 682 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 PRNPP04156 253 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 CYP1A1P04798 512 aaPredicted RBP7.79□□□□□ -1.16
CUX1-219ENST00000606749 C1SP09871 688 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 CHRNB2P17787 502 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 EPHA8P29322 1005 aaPredicted RBP7.79□□□□□ -1.16
CUX1-219ENST00000606749 ADRA1BP35368 520 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 KLK7P49862 253 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 CLCN6P51797 869 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 POLR2FP61218 127 aaKnown RBP7.79□□□□□ -1.16
CUX1-219ENST00000606749 ATP11AP98196 1134 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 CDR2Q01850 454 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 CYP4F3Q08477 520 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 CCDC15Q0P6D6 951 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 DNAJC3Q13217 504 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 KRT31Q15323 416 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 ZNF284Q2VY69 593 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 CCDC14Q49A88 953 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 SETMARQ53H47 684 aaPredicted RBP7.79□□□□□ -1.16
CUX1-219ENST00000606749 RAB6CQ53S08 254 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 SFMBT2Q5VUG0 894 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 C19orf48Q6RUI8 117 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 ZNF783Q6ZMS7 281 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 DPY19L3Q6ZPD9 716 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 ERN2Q76MJ5 926 aaKnown RBP7.79□□□□□ -1.16
CUX1-219ENST00000606749 PHLDB2Q86SQ0 1253 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 TMPRSS12Q86WS5 348 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 HORMAD1Q86X24 394 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 FAM131BQ86XD5 332 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 ZNF677Q86XU0 584 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 OXR1Q8N573 874 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 EMC1Q8N766 993 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 PDCD7Q8N8D1 485 aaKnown RBP7.79□□□□□ -1.16
CUX1-219ENST00000606749 TMEM145Q8NBT3 493 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 CHST14Q8NCH0 376 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 SLC30A5Q8TAD4 765 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 SLC20A1Q8WUM9 679 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 KLK6Q92876 244 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 ARRDC3Q96B67 414 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 KLHDC7BQ96G42 594 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 CCDC114Q96M63 670 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 SPON2Q9BUD6 331 aa7.79□□□□□ -1.16
CUX1-219ENST00000606749 HDAC8Q9BY41 377 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms