RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 CPP00450 1065 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 RHOCP08134 193 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MYL4P12829 197 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MYOGP15173 224 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 EPCAMP16422 314 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 NFKB1P19838 968 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PRKCHP24723 683 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 HOXD9P28356 352 aaPredicted RBP12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 AVPR1AP37288 418 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ELK3P41970 407 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 GEMIN4P57678 1058 aaKnown RBP12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 GPX6P59796 221 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CYP4F8P98187 520 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 GAD2Q05329 585 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 GABPB1Q06547 395 aaPredicted RBP12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CDH17Q12864 832 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 USP4Q13107 963 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SLC12A1Q13621 1099 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 KCNC3Q14003 757 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 FASTKD3Q14CZ7 662 aaKnown RBP12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 KCTD19Q17RG1 926 aaPredicted RBP12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MPPE1Q53F39 396 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 RALGPS1Q5JS13 557 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 FAXCQ5TGI0 409 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 FAM109BQ6ICB4 259 aaPredicted RBP12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TAOK1Q7L7X3 1001 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 HS6ST3Q8IZP7 471 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CMTM8Q8IZV2 173 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CCDC33Q8N5R6 958 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MAB21L3Q8N8X9 362 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 OR2W6PQ8NHA6 318 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 GSDMBQ8TAX9 411 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ARL8AQ96BM9 186 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TADA1Q96BN2 335 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 IMP4Q96G21 291 aaKnown RBP12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 AGAP3Q96P47 875 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CYTH2Q99418 400 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 WDR83Q9BRX9 315 aaKnown RBP12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 DHRS4Q9BTZ2 278 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SLC46A2Q9BY10 475 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PBX4Q9BYU1 374 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 IL22Q9GZX6 179 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 VPS37BQ9H9H4 285 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ARNT2Q9HBZ2 717 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 DNAJC17Q9NVM6 304 aaKnown RBP12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 RBM22Q9NW64 420 aaKnown RBP eCLIP12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PSD3Q9NYI0 1048 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 BFARQ9NZS9 450 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TBC1D14Q9P2M4 693 aa12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 DNMT3BQ9UBC3 853 aaKnown RBP12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ZC3H7BQ9UGR2 993 aaKnown RBP12.52□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 KIAA1549LQ6ZVL6 1849 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MOSPD3O75425 235 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 FAM155BO75949 473 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ALDH1A2O94788 518 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 HLA-DQB2P05538 268 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PGAM1P18669 254 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 RPS24P62847 133 aaKnown RBP12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SKOR1P84550 965 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 INO80DQ53TQ3 878 aaPredicted RBP12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 GPR158Q5T848 1215 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PPP2R2DQ66LE6 453 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CXorf57Q6NSI4 855 aaKnown RBP12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 RFWD3Q6PCD5 774 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TMEM184AQ6ZMB5 413 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 KDM7AQ6ZMT4 941 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ARHGAP36Q6ZRI8 547 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 C3orf62Q6ZUJ4 267 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 DEPDC1BQ8WUY9 529 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TTC17Q96AE7 1141 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ZNF707Q96C28 371 aaPredicted RBP12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 TMA16Q96EY4 203 aaKnown RBP12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 STAMBPL1Q96FJ0 436 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PSKH2Q96QS6 385 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MLPHQ9BV36 600 aaPredicted RBP12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 POLR1EQ9GZS1 481 aaKnown RBP12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CNOT10Q9H9A5 744 aaKnown RBP12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MRM3Q9HC36 420 aaKnown RBP12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 VPS18Q9P253 973 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PCDH10Q9P2E7 1040 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PSMC3IPQ9P2W1 217 aaPredicted RBP12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SEPT3Q9UH03 358 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 RABGEF1Q9UJ41 708 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ZNF180Q9UJW8 692 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CHMP2BQ9UQN3 213 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 MYO7AQ13402 2215 aa12.51□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 GRXCR1A8MXD5 290 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 LEFTY2O00292 366 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 SLC9A3R1O14745 358 aaPredicted RBP12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 EPOP01588 193 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CYBBP04839 570 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 IRF1P10914 325 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 NR1D1P20393 614 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ADRA1AP35348 466 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 CCR2P41597 374 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 PLK1P53350 603 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ZXDBP98169 803 aa12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 ILF2Q12905 390 aaKnown RBP12.5□□□□□ -0.41
NEDD8-MDP1-203ENST00000604306 LBRQ14739 615 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms