RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 SERPINH1P50454 418 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 COPAP53621 1224 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 ARF5P84085 180 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 ZBTB16Q05516 673 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 SERINC3Q13530 473 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 ELAVL3Q14576 367 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 ELF2Q15723 593 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 ATP13A4Q4VNC1 1196 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 C9orf64Q5T6V5 341 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 SLC36A4Q6YBV0 504 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 CPNE8Q86YQ8 564 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 TPCN2Q8NHX9 752 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 FAM71BQ8TC56 605 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 CASKIN2Q8WXE0 1202 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 PTPRN2Q92932 1015 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 HMCESQ96FZ2 354 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 CELF6Q96J87 481 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 ZNF670Q9BS34 389 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 MAK16Q9BXY0 300 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 CEP44Q9C0F1 390 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 MKRN2Q9H000 416 aaKnown RBP16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 EPC1Q9H2F5 836 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 MTG2Q9H4K7 406 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 LRRC19Q9H756 370 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 KLHL11Q9NVR0 708 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 NCKAP1Q9Y2A7 1128 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 SHROOM3Q8TF72 1996 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 RALGAPA1Q6GYQ0 2036 aa16.35■□□□□ 0.21
PPFIA3-213ENST00000602905 ABCA7Q8IZY2 2146 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 LRRD1A4D1F6 860 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 RCCD1A6NED2 376 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 C1QTNF3-AMACRE9PGA6 284 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 DFFAO00273 331 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 DCLK1O15075 740 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 ALOX15BO15296 676 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 PSTPIP1O43586 416 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 MT-CO1P00395 513 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 KRT1P04264 644 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 KDELR1P24390 212 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 OXTRP30559 389 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 P2RY2P41231 377 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 DNA2P51530 1060 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 MMRN1Q13201 1228 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 SRSF5Q13243 272 aaKnown RBP16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 DPYSL3Q14195 570 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 C22orf39Q6P5X5 142 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 Q6ZVU0 165 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 CACUL1Q86Y37 369 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 STK40Q8N2I9 435 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 PCDH20Q8N6Y1 951 aaKnown RBP16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 KIAA1524Q8TCG1 905 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 GANCQ8TET4 914 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 FRS2Q8WU20 508 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 RLN3Q8WXF3 142 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 SLC39A8Q9C0K1 460 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 SLC6A17Q9H1V8 727 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 RSPH9Q9H1X1 276 aaPredicted RBP16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 NOL6Q9H6R4 1146 aaKnown RBP16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 SP110Q9HB58 689 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 ITM2CQ9NQX7 267 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 INVSQ9Y283 1065 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 HYOU1Q9Y4L1 999 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 SDK1Q7Z5N4 2213 aa16.34■□□□□ 0.21
PPFIA3-213ENST00000602905 KRT86O43790 486 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 NDUFS2O75306 463 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 ADH1BP00325 375 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 CD48P09326 243 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 PAPOLAP51003 745 aaKnown RBP16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 ARSEP51690 589 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 RPS14P62263 151 aaKnown RBP16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 GSE1Q14687 1217 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 MAP7D1Q3KQU3 841 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 ANKRD20A8PQ5CZ79 823 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 FAM46CQ5VWP2 391 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 VSIG1Q86XK7 387 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 MMAAQ8IVH4 418 aaKnown RBP16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 SYCE1Q8N0S2 351 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 TSC1Q92574 1164 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 ISG20Q96AZ6 181 aaKnown RBP16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 LACRTQ9GZZ8 138 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 UBA2Q9UBT2 640 aaPredicted RBP16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 CYP8B1Q9UNU6 501 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 SMG5Q9UPR3 1016 aaKnown RBP16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 ADGRG1Q9Y653 693 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 DUSP10Q9Y6W6 482 aa16.33■□□□□ 0.2
PPFIA3-213ENST00000602905 MACROD2A1Z1Q3 448 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 ZNF487B1APH4 448 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 K7ERQ8 282 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 MCF2LO15068 1137 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 SMAD6O43541 496 aaKnown RBP16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 IL1BP01584 269 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 CCDC175P0C221 793 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 VAV1P15498 845 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 PSMD8P48556 350 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 SNRPD1P62314 119 aaKnown RBP16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 CST6Q15828 149 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 INO80DQ53TQ3 878 aaPredicted RBP16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 CARD16Q5EG05 197 aa16.32■□□□□ 0.2
PPFIA3-213ENST00000602905 AFMIDQ63HM1 303 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms