RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PDLIM5Q96HC4 596 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 FAM111AQ96PZ2 611 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 PPP1R10Q96QC0 940 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 NUDCD1Q96RS6 583 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 STK33Q9BYT3 514 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 ELP3Q9H9T3 547 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 SPACA1Q9HBV2 294 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 C8orf4Q9NR00 106 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 TBC1D23Q9NUY8 699 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 PTTG2Q9NZH5 202 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 AKT3Q9Y243 479 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 TBC1D30Q9Y2I9 924 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 USP15Q9Y4E8 981 aaPredicted RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 TELO2Q9Y4R8 837 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 ARFGEF1Q9Y6D6 1849 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 A0A1B0GTH6 734 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 MEX3AA1L020 520 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 SNTNA6NMZ2 147 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 E9PBE3 544 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 GUCY1B2O75343 617 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 DAB1O75553 588 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 TMIGD3P0DMS9 266 aaPredicted RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 NR2F1P10589 423 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 ODC1P11926 461 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 PRKACAP17612 351 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 POU3F4P49335 361 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 ZNF41P51814 821 aaPredicted RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 RAC3P60763 192 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 KRT85P78386 507 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CCINQ13939 588 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CYTH1Q15438 398 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 OR7E24Q6IFN5 339 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 NOTUMQ6P988 496 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 PTCHD4Q6ZW05 846 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 PRPF39Q86UA1 669 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 SRRM1Q8IYB3 904 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 BBS5Q8N3I7 341 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 C19orf47Q8N9M1 422 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 HCAR2Q8TDS4 363 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 RAB24Q969Q5 203 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 TBC1D10AQ9BXI6 508 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 CACNG6Q9BXT2 260 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 ABCG8Q9H221 673 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 C12orf4Q9NQ89 552 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 DDX43Q9NXZ2 648 aaKnown RBP5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 HSF4Q9ULV5 492 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 ABCC4O15439 1325 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 IRS2Q9Y4H2 1338 aa5.13□□□□□ -1.59
SPTBN1-206ENST00000602898 KDM6AO15550 1401 aaPredicted RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 A0A1W2PPC4 97 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 XKRY2A2RUG3 117 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 TGFBR3LH3BV60 316 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 J3QW42 95 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 SULT1B1O43704 296 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 SPOPO43791 374 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 CIDEAO60543 219 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 ATP9AO75110 1047 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 GJB1P08034 283 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 TUBG1P23258 451 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 TBXAS1P24557 533 aaPredicted RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 WNT5AP41221 380 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 MAGEA4P43358 317 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 PTDSS1P48651 473 aaKnown RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 ARFIP2P53365 341 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 FOXO4P98177 505 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 CTBSQ01459 385 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 PRKCEQ02156 737 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 ITGA9Q13797 1035 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 UBAP2LQ14157 1087 aaKnown RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 KPNB1Q14974 876 aaKnown RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 TRAPPC3LQ5T215 181 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 CES4AQ5XG92 561 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 DENND2CQ68D51 928 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 FSTL4Q6MZW2 842 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 SEZ6L2Q6UXD5 910 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 SLC30A10Q6XR72 485 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 ZNF852Q6ZMS4 543 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 CLVS1Q8IUQ0 354 aaPredicted RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 GALNT4Q8N4A0 578 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 ADCY4Q8NFM4 1077 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 AKR7LQ8NHP1 331 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 ANGPTL6Q8NI99 470 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 KAT2AQ92830 837 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 ZNF837Q96EG3 531 aaPredicted RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 KTI12Q96EK9 354 aaPredicted RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 LRRC46Q96FV0 321 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 PIP5K1AQ99755 562 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 TRIM2Q9C040 744 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 TFB2MQ9H5Q4 396 aaKnown RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 TUBG2Q9NRH3 451 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 FARSBQ9NSD9 589 aaKnown RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 POLR3BQ9NW08 1133 aaPredicted RBP5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 GID8Q9NWU2 228 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 HACD3Q9P035 362 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 COX16Q9P0S2 106 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 GMIPQ9P107 970 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 WHRNQ9P202 907 aa5.12□□□□□ -1.59
SPTBN1-206ENST00000602898 RCOR1Q9UKL0 485 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms