RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 NINJ2Q9NZG7 142 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 IKZF3Q9UKT9 509 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 AXIN2Q9Y2T1 843 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 TNPO3Q9Y5L0 923 aaKnown RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 CPS1P31327 1500 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 SH3BGRLO75368 114 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 PRG2P13727 222 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 ZNF7P17097 686 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 ITGB3BPQ13352 177 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 FBXO30Q8TB52 745 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 MTG1Q9BT17 334 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 WBP11Q9Y2W2 641 aaKnown RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 CHD2O14647 1828 aaKnown RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 CHADO15335 359 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 CHRNGP07510 517 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 RARAP10276 462 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 LPIN1Q14693 890 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 ZIK1Q3SY52 487 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 CCDC157Q569K6 752 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 OFCC1Q8IZS5 231 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 AGAP11Q8TF27 550 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 HDAC7Q8WUI4 952 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 GMPPBQ9Y5P6 360 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 PPRC1Q5VV67 1664 aaKnown RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 ASTN2O75129 1339 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 PLOD3O60568 738 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 TROAPQ12815 778 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 MTA1Q13330 715 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 ACOX1Q15067 660 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 ZHX1-C8orf76Q96EF9 292 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 GORASP1Q9BQQ3 440 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 SORCS3Q9UPU3 1222 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 COMMD3-BMI1R4GMX3 469 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 A0A087WZ62 844 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 WWP2O00308 870 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 PIGNO95427 931 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 CXCL8P10145 99 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 ROR2Q01974 943 aaKnown RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 SFRP1Q8N474 314 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 IL22Q9GZX6 179 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 ALG9Q9H6U8 611 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 ARL15Q9NXU5 204 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 TMCO1Q9UM00 188 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 MICAL2O94851 1124 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 HMGCRP04035 888 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 CRATP43155 626 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 RRP1BQ14684 758 aaKnown RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 FBXO47Q5MNV8 452 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 INTS11Q5TA45 600 aaKnown RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 OLFML2AQ68BL7 652 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 RNF180Q86T96 592 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 PJA1Q8NG27 643 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 TSPAN16Q9UKR8 245 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 SHROOM3Q8TF72 1996 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 NUP205Q92621 2012 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 HAT1O14929 419 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 ZNF24P17028 368 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 FBXO42Q6P3S6 717 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 CRELD2Q6UXH1 353 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 BTN2A1Q7KYR7 527 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 LRRC17Q8N6Y2 441 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 CCDC185Q8N715 623 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 PHF10Q8WUB8 498 aaKnown RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 PLGRKTQ9HBL7 147 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 MGRN1O60291 552 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 CYP2B6P20813 491 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 HSF2Q03933 536 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 STK40Q8N2I9 435 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 ING3Q9NXR8 418 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 CCDC162PA2VCL2 907 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 ITGA3P26006 1051 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 RPL5P46777 297 aaKnown RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 ACSM2AQ08AH3 577 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 NFE2Q16621 373 aaPredicted RBP9.73□□□□□ -0.85
CSMD1-217ENST00000602723 ACSM2BQ68CK6 577 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 KATNAL2Q8IYT4 538 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 POC5Q8NA72 575 aa9.73□□□□□ -0.85
CSMD1-217ENST00000602723 DBTP11182 482 aaKnown RBP9.72□□□□□ -0.85
CSMD1-217ENST00000602723 MAPK9P45984 424 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 TSC22D1Q15714 1073 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 GCNT7Q6ZNI0 430 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 RBM44Q6ZP01 1051 aaKnown RBP9.72□□□□□ -0.85
CSMD1-217ENST00000602723 DNAAF5Q86Y56 855 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 FBXO16Q8IX29 292 aaPredicted RBP9.72□□□□□ -0.85
CSMD1-217ENST00000602723 OSBPL11Q9BXB4 747 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 FAM25EA8MYX2 175 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 AGRPO00253 132 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 LIN7AO14910 233 aaPredicted RBP9.72□□□□□ -0.85
CSMD1-217ENST00000602723 FAM86B2P0C5J1 330 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 LSM3P62310 102 aaKnown RBP9.72□□□□□ -0.85
CSMD1-217ENST00000602723 TTMPQ5BVD1 217 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 SCUBE3Q8IX30 993 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 CIPCQ9C0C6 399 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 IL2P60568 153 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 COPZ1P61923 177 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 BIKQ13323 160 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 PAN2Q504Q3 1202 aaKnown RBP9.72□□□□□ -0.85
CSMD1-217ENST00000602723 DEPDC4Q8N2C3 294 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 SMYD1Q8NB12 490 aa9.72□□□□□ -0.85
CSMD1-217ENST00000602723 FAM81AQ8TBF8 368 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms