RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 LRIT3Q3SXY7 679 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 FNBP1LQ5T0N5 605 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 TMCO4Q5TGY1 634 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 ZBED8Q8IZ13 594 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 BBS5Q8N3I7 341 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 KIAA1958Q8N8K9 716 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 OR52K2Q8NGK3 314 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 BHMTQ93088 406 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 SERPINB12Q96P63 405 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 GLOD4Q9HC38 313 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 PLAAQ9Y263 795 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 AAR2Q9Y312 384 aaKnown RBP18.34■□□□□ 0.53
VRK3-225ENST00000601912 A0A1W2PPC1 479 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 E7ESA3 106 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 RIPK2O43353 540 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 ANXA9O76027 345 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 MMP13P45452 471 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 IFNAR2P48551 515 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 FAM193AP78312 1265 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 SLC10A7Q0GE19 358 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 ADAM15Q13444 863 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 LBRQ14739 615 aaKnown RBP18.34■□□□□ 0.53
VRK3-225ENST00000601912 BBS9Q3SYG4 887 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 DNAJC21Q5F1R6 531 aaKnown RBP18.34■□□□□ 0.53
VRK3-225ENST00000601912 ATAT1Q5SQI0 421 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 CES5AQ6NT32 575 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 SYCE2Q6PIF2 218 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 NPAS3Q8IXF0 933 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 TEX26Q8N6G2 289 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 ZIM3Q96PE6 472 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 FCRL5Q96RD9 977 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 ACE2Q9BYF1 805 aaPredicted RBP18.34■□□□□ 0.53
VRK3-225ENST00000601912 GDE1Q9NZC3 331 aa18.34■□□□□ 0.53
VRK3-225ENST00000601912 TMEM265A0A087WTH1 108 aa18.33■□□□□ 0.52
VRK3-225ENST00000601912 CACNG3O60359 315 aa18.33■□□□□ 0.52
VRK3-225ENST00000601912 AP2A1O95782 977 aa18.33■□□□□ 0.52
VRK3-225ENST00000601912 HLA-DQB2P05538 268 aa18.33■□□□□ 0.52
VRK3-225ENST00000601912 MLNP12872 115 aa18.33■□□□□ 0.52
VRK3-225ENST00000601912 HOXD9P28356 352 aaPredicted RBP18.33■□□□□ 0.52
VRK3-225ENST00000601912 SLC29A2Q14542 456 aa18.33■□□□□ 0.52
VRK3-225ENST00000601912 KYNUQ16719 465 aa18.33■□□□□ 0.52
VRK3-225ENST00000601912 LRIG3Q6UXM1 1119 aa18.33■□□□□ 0.52
VRK3-225ENST00000601912 GET4Q7L5D6 327 aaPredicted RBP18.33■□□□□ 0.52
VRK3-225ENST00000601912 OTOP3Q7RTS5 596 aa18.33■□□□□ 0.52
VRK3-225ENST00000601912 RIN3Q8TB24 985 aa18.33■□□□□ 0.52
VRK3-225ENST00000601912 PYROXD1Q8WU10 500 aa18.33■□□□□ 0.52
VRK3-225ENST00000601912 FGF13Q92913 245 aa18.33■□□□□ 0.52
VRK3-225ENST00000601912 C9orf72Q96LT7 481 aa18.33■□□□□ 0.52
VRK3-225ENST00000601912 NINJ2Q9NZG7 142 aa18.33■□□□□ 0.52
VRK3-225ENST00000601912 CBX4O00257 560 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 ACSL3O95573 720 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 EIF3BP55884 814 aaKnown RBP18.32■□□□□ 0.52
VRK3-225ENST00000601912 TNK2Q07912 1038 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 ITKQ08881 620 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 IFFO1Q0D2I5 559 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 CBLBQ13191 982 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 ZNF235Q14590 738 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 RFTN1Q14699 578 aaPredicted RBP18.32■□□□□ 0.52
VRK3-225ENST00000601912 FSCBQ5H9T9 825 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 POTEHQ6S545 545 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 CAND1Q86VP6 1230 aaKnown RBP18.32■□□□□ 0.52
VRK3-225ENST00000601912 ZNF557Q8N988 423 aaPredicted RBP18.32■□□□□ 0.52
VRK3-225ENST00000601912 FIBINQ8TAL6 211 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 SMARCD2Q92925 531 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 IRF7Q92985 503 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 FEM1AQ9BSK4 669 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 LRRC40Q9H9A6 602 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 PDFQ9HBH1 243 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 NT5MQ9NPB1 228 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 PLK2Q9NYY3 685 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 KIAA1522Q9P206 1035 aaPredicted RBP18.32■□□□□ 0.52
VRK3-225ENST00000601912 UBA2Q9UBT2 640 aaPredicted RBP18.32■□□□□ 0.52
VRK3-225ENST00000601912 VPS28Q9UK41 221 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 CHD5Q8TDI0 1954 aa18.32■□□□□ 0.52
VRK3-225ENST00000601912 C2orf16Q68DN1 1984 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 OPA1O60313 960 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 SUN1O94901 812 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 NUDT17P0C025 328 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 GEMP55040 296 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 MSS51Q4VC12 460 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 HSP90B2PQ58FF3 399 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 FAM78AQ5JUQ0 283 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 HP1BP3Q5SSJ5 553 aaPredicted RBP18.31■□□□□ 0.52
VRK3-225ENST00000601912 FYB2Q5VWT5 728 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 LRRC8BQ6P9F7 803 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.31■□□□□ 0.52
VRK3-225ENST00000601912 GOLGA6L1Q8N7Z2 621 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 LRRC39Q96DD0 335 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 ZNF419Q96HQ0 510 aaPredicted RBP18.31■□□□□ 0.52
VRK3-225ENST00000601912 ASB16Q96NS5 453 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 SLC25A51Q9H1U9 297 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 EPB41L4BQ9H329 900 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 SPHK2Q9NRA0 654 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 SEPT3Q9UH03 358 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 AP3B1O00203 1094 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 AVILO75366 819 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 MZF1P28698 734 aaPredicted RBP18.31■□□□□ 0.52
VRK3-225ENST00000601912 CSKP41240 450 aa18.31■□□□□ 0.52
VRK3-225ENST00000601912 FASTKD3Q14CZ7 662 aaKnown RBP18.31■□□□□ 0.52
VRK3-225ENST00000601912 CCDC38Q502W7 563 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms