RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 OTOP3Q7RTS5 596 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 TEX26Q8N6G2 289 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 GDPD5Q8WTR4 605 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 ZNF599Q96NL3 588 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 WDR83Q9BRX9 315 aaKnown RBP18■□□□□ 0.47
SHKBP1-224ENST00000600718 DENND4CQ5VZ89 1909 aa18■□□□□ 0.47
SHKBP1-224ENST00000600718 TBL1XO60907 577 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 ANXA9O76027 345 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 BMP8BP34820 402 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 ETFBP38117 255 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 GPX6P59796 221 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 MTM1Q13496 603 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 SLC5A9Q2M3M2 681 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 TTMPQ5BVD1 217 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 AGBL2Q5U5Z8 902 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 C3orf62Q6ZUJ4 267 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 SH3RF2Q8TEC5 729 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 ATP6V1G3Q96LB4 118 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 SIGLEC10Q96LC7 697 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 LRRC40Q9H9A6 602 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 PIDD1Q9HB75 910 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 CHMP2BQ9UQN3 213 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 A0A0D9SEW6 157 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 HMGB1P1B2RPK0 211 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 SPAG6O75602 509 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 HLA-DQB2P05538 268 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 IVLP07476 585 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 GRIA1P42261 906 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 NTHL1P78549 312 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 IL31Q6EBC2 164 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 IGDCC3Q8IVU1 814 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 PABPC5Q96DU9 382 aaKnown RBP17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 MLPHQ9BV36 600 aaPredicted RBP17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 CENPHQ9H3R5 247 aa17.99■□□□□ 0.47
SHKBP1-224ENST00000600718 NYNRINQ9P2P1 1898 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 TLDC2A0PJX2 215 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 SDR42E2A6NKP2 422 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 AP3B1O00203 1094 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 SCAMP3O14828 347 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 KDELR3O43731 214 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 GSTA2P09210 222 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 MMP13P45452 471 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 GEMP55040 296 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 SLC10A7Q0GE19 358 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 MPPE1Q53F39 396 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 MPP7Q5T2T1 576 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 BBS7Q8IWZ6 715 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 AGGF1Q8N302 714 aaeCLIP17.98■□□□□ 0.477e-20■■■■□ 22.6
SHKBP1-224ENST00000600718 TDRD5Q8NAT2 981 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 TTC16Q8NEE8 873 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 OR7D4Q8NG98 312 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 OR52K2Q8NGK3 314 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 SMG7Q92540 1137 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 PGM2Q96G03 612 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 ZNF419Q96HQ0 510 aaPredicted RBP17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 EBNA1BP2Q99848 306 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 SMG9Q9H0W8 520 aaKnown RBP17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 SLC25A51Q9H1U9 297 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 PDFQ9HBH1 243 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 TDP1Q9NUW8 608 aa17.98■□□□□ 0.47
SHKBP1-224ENST00000600718 EPOPA6NHQ4 379 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 H0Y626 953 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 LUC7L3O95232 432 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 CPP00450 1065 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 SSTR1P30872 391 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 OXCT1P55809 520 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 KCNC3Q14003 757 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 SPARCL1Q14515 664 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 LBRQ14739 615 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 TMCO4Q5TGY1 634 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 NAPEPLDQ6IQ20 393 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 CXorf57Q6NSI4 855 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 LINC00523Q86TU6 105 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 USP13Q92995 863 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 PPP2R3CQ969Q6 453 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 OXNAD1Q96HP4 312 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 SPON2Q9BUD6 331 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 ACE2Q9BYF1 805 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 PPCSQ9HAB8 311 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 NT5MQ9NPB1 228 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 CASS4Q9NQ75 786 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 HAUS2Q9NVX0 235 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 BCCIPQ9P287 314 aaKnown RBP eCLIP17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 ZC3H7BQ9UGR2 993 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 MRPS23Q9Y3D9 190 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 TTLL3Q9Y4R7 772 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 HOXD9P28356 352 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 RNF219Q5W0B1 726 aaPredicted RBP17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 CCNJLQ8IV13 435 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 CARNMT1Q8N4J0 409 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 EPS8L3Q8TE67 593 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 MRPL38Q96DV4 380 aaKnown RBP17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 SFXN1Q9H9B4 322 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 DZANK1Q9NVP4 752 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 VPS18Q9P253 973 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 RABGEF1Q9UJ41 708 aa17.97■□□□□ 0.47
SHKBP1-224ENST00000600718 RGS16O15492 202 aaPredicted RBP17.96■□□□□ 0.47
SHKBP1-224ENST00000600718 TCF3P15923 654 aa17.96■□□□□ 0.47
SHKBP1-224ENST00000600718 LONRF1Q17RB8 773 aa17.96■□□□□ 0.47
SHKBP1-224ENST00000600718 CAPN12Q6ZSI9 719 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms