RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 PDILTQ8N807 584 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 IQUBQ8NA54 791 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 CUEDC2Q9H467 287 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 APOBEC3GQ9HC16 384 aaKnown RBP18.12■□□□□ 0.49
SSBP4-207ENST00000600244 LMBRD1Q9NUN5 540 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 CGNQ9P2M7 1197 aaKnown RBP18.12■□□□□ 0.49
SSBP4-207ENST00000600244 ZFR2Q9UPR6 939 aaKnown RBP18.12■□□□□ 0.49
SSBP4-207ENST00000600244 CEP83Q9Y592 693 aa18.12■□□□□ 0.49
SSBP4-207ENST00000600244 H3BM21 787 aa18.11■□□□□ 0.49
SSBP4-207ENST00000600244 LUC7L3O95232 432 aaKnown RBP18.11■□□□□ 0.49
SSBP4-207ENST00000600244 STAT6P42226 847 aa18.11■□□□□ 0.49
SSBP4-207ENST00000600244 VASPP50552 380 aaPredicted RBP18.11■□□□□ 0.49
SSBP4-207ENST00000600244 UBE2HP62256 183 aa18.11■□□□□ 0.49
SSBP4-207ENST00000600244 NUGGCQ68CJ6 796 aa18.11■□□□□ 0.49
SSBP4-207ENST00000600244 FMR1NBQ8N0W7 255 aaPredicted RBP18.11■□□□□ 0.49
SSBP4-207ENST00000600244 CFAP52Q8N1V2 620 aa18.11■□□□□ 0.49
SSBP4-207ENST00000600244 LMX1AQ8TE12 382 aa18.11■□□□□ 0.49
SSBP4-207ENST00000600244 DHX58Q96C10 678 aa18.11■□□□□ 0.49
SSBP4-207ENST00000600244 IL12RB2Q99665 862 aa18.11■□□□□ 0.49
SSBP4-207ENST00000600244 STRADBQ9C0K7 418 aa18.11■□□□□ 0.49
SSBP4-207ENST00000600244 TMPRSS4Q9NRS4 437 aa18.11■□□□□ 0.49
SSBP4-207ENST00000600244 ABCC13Q9NSE7 274 aa18.11■□□□□ 0.49
SSBP4-207ENST00000600244 KBTBD4Q9NVX7 518 aa18.11■□□□□ 0.49
SSBP4-207ENST00000600244 PISDQ9UG56 409 aa18.11■□□□□ 0.49
SSBP4-207ENST00000600244 PCDHB11Q9Y5F2 797 aa18.11■□□□□ 0.49
SSBP4-207ENST00000600244 PRAMEF33A0A0G2JMD5 474 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 A0A1W2PQC6 194 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 POM121BA6NF01 834 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 C1QTNF3-AMACRE9PGA6 284 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 TULP2O00295 520 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 MCF2LO15068 1137 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 ACTN4O43707 911 aaKnown RBP18.1■□□□□ 0.49
SSBP4-207ENST00000600244 PRAMEF10O60809 474 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 HLA-DRAP01903 254 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 CD58P19256 250 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 CCKBRP32239 447 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 SYKP43405 635 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 DCAF6Q58WW2 860 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 MS4A13Q5J8X5 152 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 FAM26FQ5R3K3 315 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 ARHGAP17Q68EM7 881 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 PARGQ86W56 976 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 ANKRD52Q8NB46 1076 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 GLMNQ92990 594 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 HEXIM2Q96MH2 286 aaKnown RBP18.1■□□□□ 0.49
SSBP4-207ENST00000600244 FOXP3Q9BZS1 431 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 FOXJ2Q9P0K8 574 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 USP25Q9UHP3 1055 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 PADI4Q9UM07 663 aa18.1■□□□□ 0.49
SSBP4-207ENST00000600244 TYW5A2RUC4 315 aaKnown RBP18.09■□□□□ 0.49
SSBP4-207ENST00000600244 GOLGA6L4A6NEF3 574 aa18.09■□□□□ 0.49
SSBP4-207ENST00000600244 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.09■□□□□ 0.49
SSBP4-207ENST00000600244 ALOX15BO15296 676 aa18.09■□□□□ 0.49
SSBP4-207ENST00000600244 JMJD7P0C870 316 aa18.09■□□□□ 0.49
SSBP4-207ENST00000600244 JUNDP17535 347 aa18.09■□□□□ 0.49
SSBP4-207ENST00000600244 TMEM259Q4ZIN3 620 aa18.09■□□□□ 0.49
SSBP4-207ENST00000600244 ZNF394Q53GI3 561 aa18.09■□□□□ 0.49
SSBP4-207ENST00000600244 KYAT3Q6YP21 454 aaKnown RBP18.09■□□□□ 0.49
SSBP4-207ENST00000600244 PTAR1Q7Z6K3 402 aaPredicted RBP18.09■□□□□ 0.49
SSBP4-207ENST00000600244 ATCAYQ86WG3 371 aa18.09■□□□□ 0.49
SSBP4-207ENST00000600244 CCDC117Q8IWD4 279 aaPredicted RBP18.09■□□□□ 0.49
SSBP4-207ENST00000600244 DDX50Q9BQ39 737 aaKnown RBP18.09■□□□□ 0.49
SSBP4-207ENST00000600244 NUCKS1Q9H1E3 243 aaKnown RBP18.09■□□□□ 0.49
SSBP4-207ENST00000600244 TNMDQ9H2S6 317 aa18.09■□□□□ 0.49
SSBP4-207ENST00000600244 SYNDIG1Q9H7V2 258 aa18.09■□□□□ 0.49
SSBP4-207ENST00000600244 MAGEF1Q9HAY2 307 aa18.09■□□□□ 0.49
SSBP4-207ENST00000600244 CELSR2Q9HCU4 2923 aa18.09■□□□□ 0.49
SSBP4-207ENST00000600244 D6RAR5 112 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 MTSS1O43312 755 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 ATP9BO43861 1147 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 GCATO75600 419 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 ZNF202O95125 648 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 ITIH1P19827 911 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 ETV5P41161 510 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 EIF2B5Q13144 721 aaKnown RBP18.08■□□□□ 0.48
SSBP4-207ENST00000600244 TPRG1LQ5T0D9 272 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 C1orf220Q5T0J3 134 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 SEL1L3Q68CR1 1132 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 CNNM4Q6P4Q7 775 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 GFM1Q96RP9 751 aaKnown RBP18.08■□□□□ 0.48
SSBP4-207ENST00000600244 SRRTQ9BXP5 876 aaKnown RBP18.08■□□□□ 0.48
SSBP4-207ENST00000600244 DNAI2Q9GZS0 605 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 ZNF71Q9NQZ8 489 aaPredicted RBP18.08■□□□□ 0.48
SSBP4-207ENST00000600244 DMAC2Q9NW81 257 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 SERTAD1Q9UHV2 236 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 RABGEF1Q9UJ41 708 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 LOXL2Q9Y4K0 774 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 POLQO75417 2590 aa18.08■□□□□ 0.48
SSBP4-207ENST00000600244 A0A1W2PQM1 296 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 C9orf172C9J069 976 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 IKBKBO14920 756 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 SPINT1O43278 529 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 CD82P27701 267 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 PIK3CAP42336 1068 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 PLK1P53350 603 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 TBX4P57082 545 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 CCL7P80098 99 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 SULT2A1Q06520 285 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 ADIGQ0VDE8 80 aa18.07■□□□□ 0.48
SSBP4-207ENST00000600244 SLC12A1Q13621 1099 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms