RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 C3orf70A6NLC5 250 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 RASA4BC9J798 803 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 CBX4O00257 560 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 RASA4O43374 803 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 BUB1BO60566 1050 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 CTSLP07711 333 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 TGM1P22735 817 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 AMPD1P23109 780 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 MRE11P49959 708 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 TPMTP51580 245 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 CLCN6P51797 869 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 NDST2P52849 883 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 YBEYP58557 167 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 MMRN1Q13201 1228 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 POLD3Q15054 466 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 PARP15Q460N3 678 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 PMS2CLQ68D20 193 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 KIAA1324Q6UXG2 1013 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 Q6ZVU0 165 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 CACUL1Q86Y37 369 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 PGBD3Q8N328 593 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 OR2A12Q8NGT7 310 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 SIPA1Q96FS4 1042 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 GOLPH3Q9H4A6 298 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 KLHL11Q9NVR0 708 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 WSB2Q9NYS7 404 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 SARDHQ9UL12 918 aa19.92■□□□□ 0.78
SHKBP1-221ENST00000599833 TMEM110-MUSTN1A8MSY1 372 aa19.91■□□□□ 0.78
SHKBP1-221ENST00000599833 BTNL10A8MVZ5 291 aa19.91■□□□□ 0.78
SHKBP1-221ENST00000599833 ZNF217O75362 1048 aa19.91■□□□□ 0.78
SHKBP1-221ENST00000599833 HOXD11P31277 338 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-221ENST00000599833 IL31Q6EBC2 164 aa19.91■□□□□ 0.78
SHKBP1-221ENST00000599833 C22orf39Q6P5X5 142 aa19.91■□□□□ 0.78
SHKBP1-221ENST00000599833 PRR23BQ6ZRT6 265 aa19.91■□□□□ 0.78
SHKBP1-221ENST00000599833 RAPGEF5Q92565 580 aa19.91■□□□□ 0.78
SHKBP1-221ENST00000599833 PRCCQ92733 491 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-221ENST00000599833 CELF6Q96J87 481 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-221ENST00000599833 RCOR3Q9P2K3 495 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-221ENST00000599833 SERGEFQ9UGK8 458 aa19.91■□□□□ 0.78
SHKBP1-221ENST00000599833 CYP8B1Q9UNU6 501 aa19.91■□□□□ 0.78
SHKBP1-221ENST00000599833 HYOU1Q9Y4L1 999 aa19.91■□□□□ 0.78
SHKBP1-221ENST00000599833 PTPRZ1P23471 2315 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 H3BRJ5 948 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 MCF2LO15068 1137 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 GFRA3O60609 400 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 DRD3P35462 400 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 ETFBP38117 255 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 VAV2P52735 878 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 CDH6P55285 790 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 ZBTB16Q05516 673 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 SLC20A2Q08357 652 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 ELAVL3Q14576 367 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 SPA17Q15506 151 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 ZNF776Q68DI1 518 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 LAIR1Q6GTX8 287 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 LEKR1Q6ZMV7 388 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 ARHGAP36Q6ZRI8 547 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 AADATQ8N5Z0 425 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 ATP11CQ8NB49 1132 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 PCDH19Q8TAB3 1148 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 CEP44Q9C0F1 390 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 PABPC3Q9H361 631 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 PPM1HQ9ULR3 514 aa19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 FCF1Q9Y324 198 aaKnown RBP19.9■□□□□ 0.78
SHKBP1-221ENST00000599833 J3KR12 359 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 MID1O15344 667 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 EPN2O95208 641 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 PEX11BO96011 259 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 COMTP21964 271 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 NNMTP40261 264 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 PAPOLAP51003 745 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 CST6Q15828 149 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 HADHQ16836 314 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 LRRC38Q5VT99 294 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 RALGAPA1Q6GYQ0 2036 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 RETSATQ6NUM9 610 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 CEP68Q76N32 757 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 ALYREFQ86V81 257 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 MMAAQ8IVH4 418 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 SLC41A1Q8IVJ1 513 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 DCLK2Q8N568 766 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 PQLC3Q8N755 202 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 CHST14Q8NCH0 376 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 TPCN2Q8NHX9 752 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 ISG20Q96AZ6 181 aaKnown RBP19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 DESI2Q9BSY9 194 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 TNKS2Q9H2K2 1166 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 PARD6AQ9NPB6 346 aa19.89■□□□□ 0.77
SHKBP1-221ENST00000599833 ALOX15BO15296 676 aa19.88■□□□□ 0.77
SHKBP1-221ENST00000599833 PRAMEF11O60813 436 aa19.88■□□□□ 0.77
SHKBP1-221ENST00000599833 KRT7P08729 469 aa19.88■□□□□ 0.77
SHKBP1-221ENST00000599833 GJC1P36383 396 aa19.88■□□□□ 0.77
SHKBP1-221ENST00000599833 SLC1A1P43005 524 aa19.88■□□□□ 0.77
SHKBP1-221ENST00000599833 PTGER3P43115 390 aa19.88■□□□□ 0.77
SHKBP1-221ENST00000599833 GSDMDP57764 484 aa19.88■□□□□ 0.77
SHKBP1-221ENST00000599833 CYTH1Q15438 398 aa19.88■□□□□ 0.77
SHKBP1-221ENST00000599833 ACCSLQ4AC99 568 aa19.88■□□□□ 0.77
SHKBP1-221ENST00000599833 NCBP2-AS2Q69YL0 99 aa19.88■□□□□ 0.77
SHKBP1-221ENST00000599833 C11orf63Q6NUN7 778 aa19.88■□□□□ 0.77
SHKBP1-221ENST00000599833 DPY19L3Q6ZPD9 716 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms