RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 ADH1BP00325 375 aa28.81■■■□□ 2.2
SSBP4-206ENST00000599699 H2AFZP0C0S5 128 aa28.81■■■□□ 2.2
SSBP4-206ENST00000599699 C7P10643 843 aa28.81■■■□□ 2.2
SSBP4-206ENST00000599699 DPP6P42658 865 aa28.81■■■□□ 2.2
SSBP4-206ENST00000599699 SSR1P43307 286 aaKnown RBP28.81■■■□□ 2.2
SSBP4-206ENST00000599699 CLCN6P51797 869 aa28.81■■■□□ 2.2
SSBP4-206ENST00000599699 ARHGAP8P85298 464 aa28.81■■■□□ 2.2
SSBP4-206ENST00000599699 SLC20A2Q08357 652 aa28.81■■■□□ 2.2
SSBP4-206ENST00000599699 TCEAL6Q6IPX3 200 aa28.81■■■□□ 2.2
SSBP4-206ENST00000599699 H2AFVQ71UI9 128 aa28.81■■■□□ 2.2
SSBP4-206ENST00000599699 ZNF564Q8TBZ8 553 aaPredicted RBP28.81■■■□□ 2.2
SSBP4-206ENST00000599699 TCEAL3Q969E4 200 aa28.81■■■□□ 2.2
SSBP4-206ENST00000599699 KCTD15Q96SI1 283 aaPredicted RBP28.81■■■□□ 2.2
SSBP4-206ENST00000599699 EIF3CQ99613 913 aaKnown RBP28.81■■■□□ 2.2
SSBP4-206ENST00000599699 ACE2Q9BYF1 805 aaPredicted RBP28.81■■■□□ 2.2
SSBP4-206ENST00000599699 ZWILCHQ9H900 591 aa28.81■■■□□ 2.2
SSBP4-206ENST00000599699 SPTLC3Q9NUV7 552 aa28.81■■■□□ 2.2
SSBP4-206ENST00000599699 A0A1W2PP55 124 aa28.8■■■□□ 2.2
SSBP4-206ENST00000599699 KHNYNO15037 678 aaKnown RBP28.8■■■□□ 2.2
SSBP4-206ENST00000599699 ZMPSTE24O75844 475 aa28.8■■■□□ 2.2
SSBP4-206ENST00000599699 ACSL1P33121 698 aa28.8■■■□□ 2.2
SSBP4-206ENST00000599699 USP30Q70CQ3 517 aa28.8■■■□□ 2.2
SSBP4-206ENST00000599699 PSTKQ8IV42 348 aaKnown RBP28.8■■■□□ 2.2
SSBP4-206ENST00000599699 CADM4Q8NFZ8 388 aa28.8■■■□□ 2.2
SSBP4-206ENST00000599699 TMEM74BQ9NUR3 256 aa28.8■■■□□ 2.2
SSBP4-206ENST00000599699 DONSONQ9NYP3 566 aa28.8■■■□□ 2.2
SSBP4-206ENST00000599699 PILRBQ9UKJ0 227 aa28.8■■■□□ 2.2
SSBP4-206ENST00000599699 C5AR1P21730 350 aa28.79■■■□□ 2.2
SSBP4-206ENST00000599699 RECQLP46063 649 aaPredicted RBP28.79■■■□□ 2.2
SSBP4-206ENST00000599699 SERPINH1P50454 418 aaKnown RBP28.79■■■□□ 2.2
SSBP4-206ENST00000599699 ARF5P84085 180 aa28.79■■■□□ 2.2
SSBP4-206ENST00000599699 SMTNL2Q2TAL5 461 aa28.79■■■□□ 2.2
SSBP4-206ENST00000599699 WDR45BQ5MNZ6 344 aa28.79■■■□□ 2.2
SSBP4-206ENST00000599699 C22orf39Q6P5X5 142 aa28.79■■■□□ 2.2
SSBP4-206ENST00000599699 CYP4V2Q6ZWL3 525 aaPredicted RBP28.79■■■□□ 2.2
SSBP4-206ENST00000599699 HDDC3Q8N4P3 179 aa28.79■■■□□ 2.2
SSBP4-206ENST00000599699 NIPA2Q8N8Q9 360 aa28.79■■■□□ 2.2
SSBP4-206ENST00000599699 HSPH1Q92598 858 aa28.79■■■□□ 2.2
SSBP4-206ENST00000599699 MRFAP1L1Q96HT8 127 aa28.79■■■□□ 2.2
SSBP4-206ENST00000599699 TNKS2Q9H2K2 1166 aa28.79■■■□□ 2.2
SSBP4-206ENST00000599699 SGK2Q9HBY8 427 aa28.79■■■□□ 2.2
SSBP4-206ENST00000599699 UVRAGQ9P2Y5 699 aa28.79■■■□□ 2.2
SSBP4-206ENST00000599699 LOC105378220A0A1B0GUY1 285 aaPredicted RBP28.78■■■□□ 2.2
SSBP4-206ENST00000599699 WASH4PA8MWX3 477 aa28.78■■■□□ 2.2
SSBP4-206ENST00000599699 PATE3B3GLJ2 98 aa28.78■■■□□ 2.2
SSBP4-206ENST00000599699 MCF2LO15068 1137 aa28.78■■■□□ 2.2
SSBP4-206ENST00000599699 ALOX15BO15296 676 aa28.78■■■□□ 2.2
SSBP4-206ENST00000599699 SEMA4FO95754 770 aa28.78■■■□□ 2.2
SSBP4-206ENST00000599699 DNA2P51530 1060 aa28.78■■■□□ 2.2
SSBP4-206ENST00000599699 GEMIN4P57678 1058 aaKnown RBP28.78■■■□□ 2.2
SSBP4-206ENST00000599699 BOLA3Q53S33 107 aa28.78■■■□□ 2.2
SSBP4-206ENST00000599699 KCNT1Q5JUK3 1230 aa28.78■■■□□ 2.2
SSBP4-206ENST00000599699 FAM46CQ5VWP2 391 aa28.78■■■□□ 2.2
SSBP4-206ENST00000599699 TC2NQ8N9U0 490 aa28.78■■■□□ 2.2
SSBP4-206ENST00000599699 SNX19Q92543 992 aa28.78■■■□□ 2.2
SSBP4-206ENST00000599699 SERGEFQ9UGK8 458 aa28.78■■■□□ 2.2
SSBP4-206ENST00000599699 FAM47DPA6NHR8 397 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 C1QTNF3-AMACRE9PGA6 284 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 GDF9O60383 454 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 CFIP05156 583 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 TMEM253P0C7T8 217 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 TCF4P15884 667 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 GOT1P17174 413 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 MAOBP27338 520 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 IL1R2P27930 398 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 YBEYP58557 167 aaPredicted RBP28.77■■■□□ 2.2
SSBP4-206ENST00000599699 RSPO4Q2I0M5 234 aaPredicted RBP28.77■■■□□ 2.2
SSBP4-206ENST00000599699 TRIM61Q5EBN2 209 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 DCAF12L1Q5VU92 463 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 LEKR1Q6ZMV7 388 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 RFX8Q6ZV50 586 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 CEP44Q9C0F1 390 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 NEUROG2Q9H2A3 272 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 C6orf106Q9H6K1 298 aaPredicted RBP28.77■■■□□ 2.2
SSBP4-206ENST00000599699 NOL6Q9H6R4 1146 aaKnown RBP28.77■■■□□ 2.2
SSBP4-206ENST00000599699 CDV3Q9UKY7 258 aaKnown RBP28.77■■■□□ 2.2
SSBP4-206ENST00000599699 FCF1Q9Y324 198 aaKnown RBP28.77■■■□□ 2.2
SSBP4-206ENST00000599699 ACTL7AQ9Y615 435 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 GON4LQ3T8J9 2241 aa28.77■■■□□ 2.2
SSBP4-206ENST00000599699 METTL12A8MUP2 240 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 RASA4BC9J798 803 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 RASA4O43374 803 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 BUB1O43683 1085 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 KDELR3O43731 214 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 HOXD12P35452 270 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 POM121L1PQ3SYA9 428 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 PARP15Q460N3 678 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 UMODL1-AS1Q8N2C9 162 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 AADATQ8N5Z0 425 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 OR2A12Q8NGT7 310 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 PIP4K2CQ8TBX8 421 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 HMCESQ96FZ2 354 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 ANP32EQ9BTT0 268 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 NUSAP1Q9BXS6 441 aaKnown RBP28.76■■■□□ 2.19
SSBP4-206ENST00000599699 MIR1-1HGQ9H1L0 117 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 PCED1AQ9H1Q7 454 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 STAU2Q9NUL3 570 aaKnown RBP eCLIP28.76■■■□□ 2.19
SSBP4-206ENST00000599699 SARDHQ9UL12 918 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 PPM1HQ9ULR3 514 aa28.76■■■□□ 2.19
SSBP4-206ENST00000599699 CHRNA3P32297 505 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms