RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 A0A1B0GTW7 788 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 MYO1FO00160 1098 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 KRT86O43790 486 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 PAGE1O75459 146 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 PALMO75781 387 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 ADRB1P08588 477 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 ENGP17813 658 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 IL1R2P27930 398 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 MIPP30301 263 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 RDXP35241 583 aaKnown RBP13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 GJC1P36383 396 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 NAP1L1P55209 391 aaKnown RBP13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 RPS14P62263 151 aaKnown RBP13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 SLC25A11Q02978 314 aaKnown RBP13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 ZNF177Q13360 481 aaPredicted RBP13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 AUHQ13825 339 aaKnown RBP13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 C5orf22Q49AR2 442 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 HS1BP3Q53T59 392 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 FSCBQ5H9T9 825 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 FBXL22Q6P050 247 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 LRRC31Q6UY01 552 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 NIPA2Q8N8Q9 360 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 LRRC57Q8N9N7 239 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 MYEOVQ96EZ4 313 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 C1orf74Q96LT6 269 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 TSGA10Q9BZW7 698 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 SGK2Q9HBY8 427 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 CAPN10Q9HC96 672 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 ARHGEF38Q9NXL2 777 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 PCSK1NQ9UHG2 260 aa13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 INTS6Q9UL03 887 aaKnown RBP13.15□□□□□ -0.3
SH2D3A-208ENST00000599563 ASCC3Q8N3C0 2202 aaKnown RBP13.15□□□□□ -0.31
SH2D3A-208ENST00000599563 ATXN2Q99700 1313 aaKnown RBP13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 METTL12A8MUP2 240 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 ARHGAP33O14559 1287 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 ZSCAN12O43309 604 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 FTCDO95954 541 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 CSRP1P21291 193 aaKnown RBP13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 COMTP21964 271 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 MARCKSL1P49006 195 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 CDH4P55283 916 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 PIGHQ14442 188 aaPredicted RBP13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 CA9Q16790 459 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 C11orf63Q6NUN7 778 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 SCYL2Q6P3W7 929 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 DSG4Q86SJ6 1040 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 TXLNBQ8N3L3 684 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 HDDC3Q8N4P3 179 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 DEFB119Q8N690 84 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 ZNF366Q8N895 744 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 MYO19Q96H55 970 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 MRGPRX3Q96LB0 322 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 SNRNP25Q9BV90 132 aaKnown RBP13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 BTBD1Q9H0C5 482 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 TKTL2Q9H0I9 626 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 KLHL11Q9NVR0 708 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 SLC25A13Q9UJS0 675 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 VANGL2Q9ULK5 521 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 TPX2Q9ULW0 747 aaKnown RBP13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 PACSIN2Q9UNF0 486 aaPredicted RBP13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 HS3ST4Q9Y661 456 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 LAMA1P25391 3075 aa13.14□□□□□ -0.31
SH2D3A-208ENST00000599563 UPK3BL1B0FP48 263 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 UPK3BL2E5RIL1 263 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 CDX4O14627 284 aaPredicted RBP13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 OPHN1O60890 802 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 SEMA4FO95754 770 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 ADH1BP00325 375 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 CEACAM1P13688 526 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 TNNT1P13805 278 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 MAN1A1P33908 653 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 ELAVL3Q14576 367 aaKnown RBP13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 SMTNL2Q2TAL5 461 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 ARL13BQ3SXY8 428 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 ATP13A4Q4VNC1 1196 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 DCAF12L1Q5VU92 463 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 SLFN11Q7Z7L1 901 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 DAAM2Q86T65 1068 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 SETD3Q86TU7 594 aaPredicted RBP13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 CACUL1Q86Y37 369 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 SLC35F6Q8N357 371 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 HAPLN3Q96S86 360 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 FEM1AQ9BSK4 669 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 C2orf49Q9BVC5 232 aaPredicted RBP13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 SIK2Q9H0K1 926 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 PABPC3Q9H361 631 aaKnown RBP13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 SLC32A1Q9H598 525 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 RETREG1Q9H6L5 497 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 ZWILCHQ9H900 591 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 CD93Q9NPY3 652 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 KCND1Q9NSA2 647 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 FZD4Q9ULV1 537 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 TBC1D30Q9Y2I9 924 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 ALG6Q9Y672 507 aa13.13□□□□□ -0.31
SH2D3A-208ENST00000599563 NUMA1Q14980 2115 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 BCAT2O15382 392 aaPredicted RBP13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 SIN3BO75182 1162 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 RNF8O76064 485 aa13.12□□□□□ -0.31
SH2D3A-208ENST00000599563 KCNK5O95279 499 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms