RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 FILIP1LQ4L180 1135 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 ACBD5Q5T8D3 534 aaPredicted RBP19.21■□□□□ 0.67
PNKP-213ENST00000599543 LRRC31Q6UY01 552 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 XYLT1Q86Y38 959 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 NT5C3BQ969T7 300 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 FAM131CQ96AQ9 280 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 ERGIC2Q96RQ1 377 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 TBCBQ99426 244 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 ANLNQ9NQW6 1124 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 RALYQ9UKM9 306 aaKnown RBP19.21■□□□□ 0.67
PNKP-213ENST00000599543 SARDHQ9UL12 918 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 PPM1HQ9ULR3 514 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 HS3ST2Q9Y278 367 aa19.21■□□□□ 0.67
PNKP-213ENST00000599543 FARP1Q9Y4F1 1045 aaPredicted RBP19.21■□□□□ 0.67
PNKP-213ENST00000599543 A0A1B0GTH6 734 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 MCF2LO15068 1137 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 YKT6O15498 198 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 PLRG1O43660 514 aaKnown RBP19.2■□□□□ 0.66
PNKP-213ENST00000599543 DKK1O94907 266 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 ARRB1P49407 418 aaPredicted RBP19.2■□□□□ 0.66
PNKP-213ENST00000599543 ALFQ53S48 1182 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 CCDC157Q569K6 752 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 PRAMEF14Q5SWL7 426 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 NAPEPLDQ6IQ20 393 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 TMPRSS7Q7RTY8 843 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 SETD3Q86TU7 594 aaPredicted RBP19.2■□□□□ 0.66
PNKP-213ENST00000599543 PRPF39Q86UA1 669 aaKnown RBP19.2■□□□□ 0.66
PNKP-213ENST00000599543 PROSER1Q86XN7 944 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 GALNT15Q8N3T1 639 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 ATP11CQ8NB49 1132 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 PIP4K2CQ8TBX8 421 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 CCDC114Q96M63 670 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 STK33Q9BYT3 514 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 IFNKQ9P0W0 207 aa19.2■□□□□ 0.66
PNKP-213ENST00000599543 KNTC1P50748 2209 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 A0A1W2PR77 199 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 GOLGA8SH3BPF8 625 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 I6L893 689 aaPredicted RBP19.19■□□□□ 0.66
PNKP-213ENST00000599543 TLR4O00206 839 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 WNT9AO14904 365 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 ITGAVP06756 1048 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 SRCP12931 536 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 MAT2AP31153 395 aaKnown RBP19.19■□□□□ 0.66
PNKP-213ENST00000599543 NUDT1P36639 197 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 FLT3P36888 993 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 CNTN1Q12860 1018 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 C2CD6Q53TS8 623 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 C6orf118Q5T5N4 469 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 AGBL4Q5VU57 503 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 TFAP2DQ7Z6R9 452 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 NOP9Q86U38 636 aaKnown RBP19.19■□□□□ 0.66
PNKP-213ENST00000599543 GATAD2AQ86YP4 633 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 DCAF4L2Q8NA75 395 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 EPS8L1Q8TE68 723 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 SLC20A1Q8WUM9 679 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 CCDC86Q9H6F5 360 aaKnown RBP19.19■□□□□ 0.66
PNKP-213ENST00000599543 VPS51Q9UID3 782 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 SNX10Q9Y5X0 201 aa19.19■□□□□ 0.66
PNKP-213ENST00000599543 CACNA1GO43497 2377 aa19.18■□□□□ 0.66
PNKP-213ENST00000599543 E9PAM4 449 aa19.18■□□□□ 0.66
PNKP-213ENST00000599543 SNAP91O60641 907 aa19.18■□□□□ 0.66
PNKP-213ENST00000599543 OR1E1P30953 314 aa19.18■□□□□ 0.66
PNKP-213ENST00000599543 UBASH3AP57075 661 aa19.18■□□□□ 0.66
PNKP-213ENST00000599543 JAM2P57087 298 aa19.18■□□□□ 0.66
PNKP-213ENST00000599543 NR1I3Q14994 352 aa19.18■□□□□ 0.66
PNKP-213ENST00000599543 SETMARQ53H47 684 aaPredicted RBP19.18■□□□□ 0.66
PNKP-213ENST00000599543 TRIM69Q86WT6 500 aa19.18■□□□□ 0.66
PNKP-213ENST00000599543 ZNF683Q8IZ20 524 aa19.18■□□□□ 0.66
PNKP-213ENST00000599543 CPA5Q8WXQ8 436 aa19.18■□□□□ 0.66
PNKP-213ENST00000599543 C1orf74Q96LT6 269 aa19.18■□□□□ 0.66
PNKP-213ENST00000599543 PSMB7Q99436 277 aa19.18■□□□□ 0.66
PNKP-213ENST00000599543 TMPRSS4Q9NRS4 437 aa19.18■□□□□ 0.66
PNKP-213ENST00000599543 MPP6Q9NZW5 540 aa19.18■□□□□ 0.66
PNKP-213ENST00000599543 DMTF1Q9Y222 760 aa19.18■□□□□ 0.66
PNKP-213ENST00000599543 ITPR1Q14643 2758 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 NBEAQ8NFP9 2946 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 DRGXA6NNA5 263 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 MAGEC1O60732 1142 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 SRGAP2O75044 1071 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 MT-CO1P00395 513 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 MMEP08473 750 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 RRM1P23921 792 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 CLCN6P51797 869 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 NXPH1P58417 271 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 NOMO3P69849 1222 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 CCDC15Q0P6D6 951 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 NAA35Q5VZE5 725 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 IQCHQ86VS3 1027 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 OXR1Q8N573 874 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 MFSD2AQ8NA29 543 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 SAP25Q8TEE9 199 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 CFAP57Q96MR6 1250 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 PREBQ9HCU5 417 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 DYRK4Q9NR20 520 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 ARHGAP20Q9P2F6 1191 aa19.17■□□□□ 0.66
PNKP-213ENST00000599543 ARID1BQ8NFD5 2236 aaPredicted RBP19.17■□□□□ 0.66
PNKP-213ENST00000599543 IGLV3-10A0A075B6K4 115 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 A0A0D9SEW6 157 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 K7ERQ8 282 aa19.16■□□□□ 0.66
PNKP-213ENST00000599543 TAF4O00268 1085 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms