RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 MAMLD1Q13495 774 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 TRIM14Q14142 442 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 POLD3Q15054 466 aaPredicted RBP14.47□□□□□ -0.09
LIG1-218ENST00000599322 SLC45A4Q5BKX6 768 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 KIAA0895LQ68EN5 471 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 ZCCHC9Q8N567 271 aaKnown RBP14.47□□□□□ -0.09
LIG1-218ENST00000599322 OR7D4Q8NG98 312 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 OR2T34Q8NGX1 318 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 OR14C36Q8NHC7 312 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 PPP1R16AQ96I34 528 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 FAM129BQ96TA1 746 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 EIF3CQ99613 913 aaKnown RBP14.47□□□□□ -0.09
LIG1-218ENST00000599322 TTYH3Q9C0H2 523 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 TMEM248Q9NWD8 314 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 MYO1AQ9UBC5 1043 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 CKAP5Q14008 2032 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 TBC1D3DA0A087WVF3 549 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 TBC1D3IA0A087WXS9 549 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 TBC1D3EA0A087X179 549 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 TBC1D3KA0A087X1G2 549 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 CXorf51AA0A1B0GTR3 108 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 TBC1D3FA6NER0 549 aaPredicted RBP14.46□□□□□ -0.09
LIG1-218ENST00000599322 ZSCAN5CA6NGD5 496 aaPredicted RBP14.46□□□□□ -0.09
LIG1-218ENST00000599322 TBC1D3LB9A6J9 549 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 I6L893 689 aaPredicted RBP14.46□□□□□ -0.09
LIG1-218ENST00000599322 FGF10O15520 208 aaPredicted RBP14.46□□□□□ -0.09
LIG1-218ENST00000599322 SLC7A4O43246 635 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 SNAP91O60641 907 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 LRIG2O94898 1065 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 TBC1D3HP0C7X1 549 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 SRCP12931 536 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 CD27P26842 260 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 N4BP2L1Q5TBK1 243 aaPredicted RBP14.46□□□□□ -0.09
LIG1-218ENST00000599322 TBC1D3GQ6DHY5 549 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 TBC1D3CQ6IPX1 549 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 PLEKHA7Q6IQ23 1121 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.46□□□□□ -0.09
LIG1-218ENST00000599322 Q6ZVU0 165 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 PRPF39Q86UA1 669 aaKnown RBP14.46□□□□□ -0.09
LIG1-218ENST00000599322 TBC1D3Q8IZP1 549 aaPredicted RBP14.46□□□□□ -0.09
LIG1-218ENST00000599322 RYBPQ8N488 228 aaPredicted RBP14.46□□□□□ -0.09
LIG1-218ENST00000599322 PCDH20Q8N6Y1 951 aaKnown RBP14.46□□□□□ -0.09
LIG1-218ENST00000599322 CCDC185Q8N715 623 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 FRS2Q8WU20 508 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 ANP32EQ9BTT0 268 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 CEP44Q9C0F1 390 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 NEUROG2Q9H2A3 272 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 KDM4CQ9H3R0 1056 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 DEF6Q9H4E7 631 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 C6orf106Q9H6K1 298 aaPredicted RBP14.46□□□□□ -0.09
LIG1-218ENST00000599322 CAPN10Q9HC96 672 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 TAS2R14Q9NYV8 317 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 ADAMTS1Q9UHI8 967 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 DNAI1Q9UI46 699 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.46□□□□□ -0.09
LIG1-218ENST00000599322 USP24Q9UPU5 2620 aa14.46□□□□□ -0.09
LIG1-218ENST00000599322 A0A0D9SEW6 157 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 KPNA3O00505 521 aaPredicted RBP14.45□□□□□ -0.1
LIG1-218ENST00000599322 DDX3XO00571 662 aaKnown RBP eCLIP14.45□□□□□ -0.1
LIG1-218ENST00000599322 CER1O95813 267 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 PMLP29590 882 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 CHRNA3P32297 505 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 NUDT1P36639 197 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 ZNF135P52742 658 aaPredicted RBP14.45□□□□□ -0.1
LIG1-218ENST00000599322 GALCP54803 685 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 C21orf59P57076 290 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 YBEYP58557 167 aaPredicted RBP14.45□□□□□ -0.1
LIG1-218ENST00000599322 TPI1P60174 286 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 RAD51Q06609 339 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 ACAP1Q15027 740 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 PPP1R15BQ5SWA1 713 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 LINGO4Q6UY18 593 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 MINDY1Q8N5J2 469 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 OR52K2Q8NGK3 314 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 PIP4K2CQ8TBX8 421 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 FNIP1Q8TF40 1166 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 BIRC7Q96CA5 298 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 PSMB7Q99436 277 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 SYT11Q9BT88 431 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 XPO4Q9C0E2 1151 aaKnown RBP14.45□□□□□ -0.1
LIG1-218ENST00000599322 ISCUQ9H1K1 167 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 FZD10Q9ULW2 581 aa14.45□□□□□ -0.1
LIG1-218ENST00000599322 TCRBV5S1A1TA0A578 114 aa14.44□□□□□ -0.1
LIG1-218ENST00000599322 TMEM191CA6NGB0 347 aa14.44□□□□□ -0.1
LIG1-218ENST00000599322 VAV1P15498 845 aa14.44□□□□□ -0.1
LIG1-218ENST00000599322 PBX1P40424 430 aa14.44□□□□□ -0.1
LIG1-218ENST00000599322 SERPINH1P50454 418 aaKnown RBP14.44□□□□□ -0.1
LIG1-218ENST00000599322 NOVA1P51513 510 aaKnown RBP14.44□□□□□ -0.1
LIG1-218ENST00000599322 CCR5P51681 352 aa14.44□□□□□ -0.1
LIG1-218ENST00000599322 SNRPD1P62314 119 aaKnown RBP14.44□□□□□ -0.1
LIG1-218ENST00000599322 SLC14A1Q13336 389 aa14.44□□□□□ -0.1
LIG1-218ENST00000599322 HNRNPDQ14103 355 aaKnown RBP14.44□□□□□ -0.1
LIG1-218ENST00000599322 SUZ12Q15022 739 aaKnown RBP14.44□□□□□ -0.1
LIG1-218ENST00000599322 ST3GAL2Q16842 350 aa14.44□□□□□ -0.1
LIG1-218ENST00000599322 CCDC122Q5T0U0 273 aa14.44□□□□□ -0.1
LIG1-218ENST00000599322 ERMARDQ5T6L9 678 aa14.44□□□□□ -0.1
LIG1-218ENST00000599322 MANEALQ5VSG8 457 aa14.44□□□□□ -0.1
LIG1-218ENST00000599322 SPECC1LQ69YQ0 1117 aa14.44□□□□□ -0.1
LIG1-218ENST00000599322 C22orf39Q6P5X5 142 aa14.44□□□□□ -0.1
LIG1-218ENST00000599322 NCEH1Q6PIU2 408 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms