RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 CYP8B1Q9UNU6 501 aa14.51□□□□□ -0.09
SHKBP1-217ENST00000598558 MYO18AQ92614 2054 aaKnown RBP14.51□□□□□ -0.09
SHKBP1-217ENST00000598558 MYO15AQ9UKN7 3530 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 IGHV1OR15-9A0A0B4J2B8 117 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 CTSLP07711 333 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 KRT7P08729 469 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 ARL4AP40617 200 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 SLC1A1P43005 524 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 MRE11P49959 708 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 SERPINH1P50454 418 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 ZNF135P52742 658 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 NDST2P52849 883 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 SIM2Q14190 667 aaPredicted RBP14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 KRT81Q14533 505 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 CYTH1Q15438 398 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 PARP15Q460N3 678 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 PLK5Q496M5 336 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 USP39Q53GS9 565 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 ANKRD20A8PQ5CZ79 823 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 LRRC38Q5VT99 294 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 METTL3Q86U44 580 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 MMAAQ8IVH4 418 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 LRRC57Q8N9N7 239 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 KRT35Q92764 455 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 FAF2Q96CS3 445 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 USP36Q9P275 1121 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 SERGEFQ9UGK8 458 aa14.5□□□□□ -0.09
SHKBP1-217ENST00000598558 GRID2IPA4D2P6 1211 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 GOLGA6L6A8MZA4 724 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 PLK4O00444 970 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 BNIP3LO60238 219 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 CNR2P34972 360 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 NNMTP40261 264 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 TPMTP51580 245 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 SLC20A2Q08357 652 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 SLC10A2Q12908 348 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 PDK2Q15119 407 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 LLGL1Q15334 1064 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 FAM182AQ5T1J6 154 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 NCBP2-AS2Q69YL0 99 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 RETSATQ6NUM9 610 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 C11orf63Q6NUN7 778 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 C22orf39Q6P5X5 142 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 ZC3H14Q6PJT7 736 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 MFSD7Q6UXD7 560 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 PRR23BQ6ZRT6 265 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 KIAA1328Q86T90 577 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 DEFB119Q8N690 84 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 LRRN4Q8WUT4 740 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 PRCCQ92733 491 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 RNF25Q96BH1 459 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 ZNF830Q96NB3 372 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 RNF157Q96PX1 679 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 CALN1Q9BXU9 219 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 LUC7LQ9NQ29 371 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 RCOR3Q9P2K3 495 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 PPM1HQ9ULR3 514 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 SMG5Q9UPR3 1016 aaKnown RBP14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 DOCK4Q8N1I0 1966 aa14.49□□□□□ -0.09
SHKBP1-217ENST00000598558 MACROD2A1Z1Q3 448 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 LRRD1A4D1F6 860 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 PRR23AA6NEV1 266 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 DFFAO00273 331 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 MCF2LO15068 1137 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 MID1O15344 667 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 ARHGAP6O43182 974 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 SPOPO43791 374 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 PRAMEF11O60813 436 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 IPO7O95373 1038 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 MAP3K6O95382 1288 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 PEX11BO96011 259 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 GKP32189 559 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 SLC8A1P32418 973 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 ETFBP38117 255 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 ADCY2Q08462 1091 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 CST6Q15828 149 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 ZNF776Q68DI1 518 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 TMCO3Q6UWJ1 677 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 DPY19L3Q6ZPD9 716 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 CEP68Q76N32 757 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 DAAM2Q86T65 1068 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 ZNF354CQ86Y25 554 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 RHOT1Q8IXI2 618 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 DCLK2Q8N568 766 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 AADATQ8N5Z0 425 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 NKD2Q969F2 451 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 PDLIM2Q96JY6 352 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 ZC3H10Q96K80 434 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 NSMCE3Q96MG7 304 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 ZNF670Q9BS34 389 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 KCNF1Q9H3M0 494 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 WSB2Q9NYS7 404 aaPredicted RBP14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 LHX3Q9UBR4 397 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 USP34Q70CQ2 3546 aa14.48□□□□□ -0.09
SHKBP1-217ENST00000598558 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 ARHGAP42A6NI28 874 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 MFSD11O43934 449 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 TMCC1O94876 653 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 IGLV3-19P01714 112 aa14.47□□□□□ -0.09
SHKBP1-217ENST00000598558 LMNAP02545 664 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms