RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 J3KR12 359 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 K7ERQ8 282 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 SYNCRIPO60506 623 aaKnown RBP22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 PRAMEF11O60813 436 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 ADAM23O75077 832 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 TJP3O95049 919 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 EPHX1P07099 455 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 HOXB2P14652 356 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 MX2P20592 715 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 TGM2P21980 687 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 PRKCHP24723 683 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 GALNT2Q10471 571 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 SLC10A2Q12908 348 aaPredicted RBP22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 BBS12Q6ZW61 710 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 SH2D3CQ8N5H7 860 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 KDM1BQ8NB78 822 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 TMEM245Q9H330 911 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 DTLQ9NZJ0 730 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 UBA2Q9UBT2 640 aaPredicted RBP22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 SUN2Q9UH99 717 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 HS3ST2Q9Y278 367 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 ACTL7AQ9Y615 435 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 RAD54BQ9Y620 910 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 ATG2BQ96BY7 2078 aa22.57■■□□□ 1.2
CHMP2A-204ENST00000597848 TRIOO75962 3097 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 ATP1A1P05023 1023 aaKnown RBP22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 SRCP12931 536 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 CXCL12P48061 93 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 SERPINH1P50454 418 aaKnown RBP22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 ENPP2Q13822 863 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 STARD3Q14849 445 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 DLG2Q15700 870 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 BZW1Q7L1Q6 419 aaKnown RBP22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 SYT13Q7L8C5 426 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 LRRC49Q8IUZ0 686 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 CCNYQ8ND76 341 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 P3H4Q92791 437 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 HAUS1Q96CS2 278 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 MYO19Q96H55 970 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 GABRG3Q99928 467 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 HERPUD2Q9BSE4 406 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 CARD9Q9H257 536 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 MTG2Q9H4K7 406 aa22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 SAE1Q9UBE0 346 aaPredicted RBP22.56■■□□□ 1.2
CHMP2A-204ENST00000597848 SMAD6O43541 496 aaKnown RBP22.55■■□□□ 1.2
CHMP2A-204ENST00000597848 ATP9BO43861 1147 aa22.55■■□□□ 1.2
CHMP2A-204ENST00000597848 CXCR5P32302 372 aa22.55■■□□□ 1.2
CHMP2A-204ENST00000597848 GARSP41250 739 aaKnown RBP22.55■■□□□ 1.2
CHMP2A-204ENST00000597848 NR2C2P49116 596 aa22.55■■□□□ 1.2
CHMP2A-204ENST00000597848 VASPP50552 380 aaPredicted RBP22.55■■□□□ 1.2
CHMP2A-204ENST00000597848 IL10RBQ08334 325 aa22.55■■□□□ 1.2
CHMP2A-204ENST00000597848 PDK1Q15118 436 aa22.55■■□□□ 1.2
CHMP2A-204ENST00000597848 DTWD2Q8NBA8 298 aa22.55■■□□□ 1.2
CHMP2A-204ENST00000597848 LRRN4Q8WUT4 740 aa22.55■■□□□ 1.2
CHMP2A-204ENST00000597848 WDR24Q96S15 920 aa22.55■■□□□ 1.2
CHMP2A-204ENST00000597848 C2orf42Q9NWW7 574 aa22.55■■□□□ 1.2
CHMP2A-204ENST00000597848 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.55■■□□□ 1.2
CHMP2A-204ENST00000597848 FCF1Q9Y324 198 aaKnown RBP22.55■■□□□ 1.2
CHMP2A-204ENST00000597848 NUP205Q92621 2012 aa22.54■■□□□ 1.2
CHMP2A-204ENST00000597848 CXorf51AA0A1B0GTR3 108 aa22.54■■□□□ 1.2
CHMP2A-204ENST00000597848 BNIP3LO60238 219 aa22.54■■□□□ 1.2
CHMP2A-204ENST00000597848 CEP104O60308 925 aa22.54■■□□□ 1.2
CHMP2A-204ENST00000597848 CD160O95971 181 aa22.54■■□□□ 1.2
CHMP2A-204ENST00000597848 PECAM1P16284 738 aaPredicted RBP22.54■■□□□ 1.2
CHMP2A-204ENST00000597848 CCR3P51677 355 aa22.54■■□□□ 1.2
CHMP2A-204ENST00000597848 CLCN6P51797 869 aa22.54■■□□□ 1.2
CHMP2A-204ENST00000597848 SATB1Q01826 763 aa22.54■■□□□ 1.2
CHMP2A-204ENST00000597848 CRY1Q16526 586 aa22.54■■□□□ 1.2
CHMP2A-204ENST00000597848 HNRNPA1L2Q32P51 320 aaKnown RBP22.54■■□□□ 1.2
CHMP2A-204ENST00000597848 TMEM92Q6UXU6 159 aa22.54■■□□□ 1.2
CHMP2A-204ENST00000597848 NSMCE1Q8WV22 266 aa22.54■■□□□ 1.2
CHMP2A-204ENST00000597848 PDFQ9HBH1 243 aa22.54■■□□□ 1.2
CHMP2A-204ENST00000597848 POLMQ9NP87 494 aaPredicted RBP22.54■■□□□ 1.2
CHMP2A-204ENST00000597848 EDDM13A0A1B0GTR0 161 aa22.53■■□□□ 1.2
CHMP2A-204ENST00000597848 APOC4-APOC2K7ER74 178 aa22.53■■□□□ 1.2
CHMP2A-204ENST00000597848 PPP1R12AO14974 1030 aaPredicted RBP22.53■■□□□ 1.2
CHMP2A-204ENST00000597848 ZBTB24O43167 697 aaPredicted RBP22.53■■□□□ 1.2
CHMP2A-204ENST00000597848 LAMTOR5O43504 91 aa22.53■■□□□ 1.2
CHMP2A-204ENST00000597848 MAFKO60675 156 aa22.53■■□□□ 1.2
CHMP2A-204ENST00000597848 APOC2P02655 101 aa22.53■■□□□ 1.2
CHMP2A-204ENST00000597848 VAV1P15498 845 aa22.53■■□□□ 1.2
CHMP2A-204ENST00000597848 DGKEP52429 567 aa22.53■■□□□ 1.2
CHMP2A-204ENST00000597848 INO80DQ53TQ3 878 aaPredicted RBP22.53■■□□□ 1.2
CHMP2A-204ENST00000597848 KIAA1211LQ6NV74 962 aa22.53■■□□□ 1.2
CHMP2A-204ENST00000597848 METTL3Q86U44 580 aaKnown RBP22.53■■□□□ 1.2
CHMP2A-204ENST00000597848 CASKIN2Q8WXE0 1202 aa22.53■■□□□ 1.2
CHMP2A-204ENST00000597848 LRFN3Q9BTN0 628 aa22.53■■□□□ 1.2
CHMP2A-204ENST00000597848 MYO18AQ92614 2054 aaKnown RBP22.53■■□□□ 1.2
CHMP2A-204ENST00000597848 A0A1W2PQF6 199 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 TMCC1O94876 653 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 COL9A1P20849 921 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 CCNCP24863 283 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 AP1B1Q10567 949 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 TIGD7Q6NT04 549 aaPredicted RBP22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 C22orf39Q6P5X5 142 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 MAMSTRQ6ZN01 415 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 Q6ZVU0 165 aa22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 ADAT2Q7Z6V5 191 aaKnown RBP22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 ZC3H18Q86VM9 953 aaKnown RBP22.52■■□□□ 1.2
CHMP2A-204ENST00000597848 SLC13A5Q86YT5 568 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms