RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 CYBBP04839 570 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 KRT10P13645 584 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 SLC6A4P31645 630 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 CTHP32929 405 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 SERPINB6P35237 376 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 CHKAP35790 457 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 VIPR2P41587 438 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 IFNAR2P48551 515 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 DYNLT1P63172 113 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 IRX4P78413 519 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 ZXDBP98169 803 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 LLGL1Q15334 1064 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 ELF2Q15723 593 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 TAZQ16635 292 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 FAM133BQ5BKY9 247 aaKnown RBP12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 FAM72AQ5TYM5 149 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 MANEALQ5VSG8 457 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 FAM72DQ6L9T8 149 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 FBXL22Q6P050 247 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 RFWD3Q6PCD5 774 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 TMCO3Q6UWJ1 677 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 FAM72BQ86X60 149 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 SLC13A5Q86YT5 568 aaPredicted RBP12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 BBS7Q8IWZ6 715 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 YAF2Q8IY57 180 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 RASGEF1CQ8N431 466 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 HJURPQ8NCD3 748 aaPredicted RBP12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 MDM1Q8TC05 714 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 ACTRT1Q8TDG2 376 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 BPIFB1Q8TDL5 484 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 WBP2Q969T9 261 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 FAF2Q96CS3 445 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 OTUB2Q96DC9 234 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 MS4A14Q96JA4 679 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 RNF157Q96PX1 679 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 PRMT1Q99873 361 aaKnown RBP12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 ZYG11BQ9C0D3 744 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 ARHGEF4Q9NR80 690 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 THG1LQ9NWX6 298 aaKnown RBP12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 PPARGC1AQ9UBK2 798 aaKnown RBP12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 STOML2Q9UJZ1 356 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 TTC7AQ9ULT0 858 aaPredicted RBP12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 MRFAP1Q9Y605 127 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 PTPN13Q12923 2485 aa12.37□□□□□ -0.43
SHKBP1-213ENST00000597325 HEPACAM2A8MVW5 462 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 SPECC1L-ADORA2AF8WAN1 911 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 DCLK1O15075 740 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 GREM1O60565 184 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 CST8O60676 142 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 RHOQP17081 205 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 TGM2P21980 687 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 FAM193AP78312 1265 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 DPYSQ14117 519 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 ADAT2Q7Z6V5 191 aaKnown RBP12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 C14orf80Q86SX3 495 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 RALGPS2Q86X27 583 aaPredicted RBP12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 CREG2Q8IUH2 290 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 CCDC117Q8IWD4 279 aaPredicted RBP12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 FAM217AQ8IXS0 508 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 CPXM2Q8N436 756 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 ZNF843Q8N446 348 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 MNS1Q8NEH6 495 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 MAGEB5Q9BZ81 275 aa12.36□□□□□ -0.43
SHKBP1-213ENST00000597325 IGLV3-10A0A075B6K4 115 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 J3QKU1 62 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 KRIT1O00522 736 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 ATXN7O15265 892 aaPredicted RBP12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 TSPAN3O60637 253 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 ERCC2P18074 760 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 AMPD1P23109 780 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 FCHO2Q0JRZ9 810 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 PON2Q15165 354 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 ZNF423Q2M1K9 1284 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 MPPE1Q53F39 396 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 SLC9A4Q6AI14 798 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 CCNI2Q6ZMN8 369 aaPredicted RBP12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 BBS12Q6ZW61 710 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 ANKS1BQ7Z6G8 1248 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 CAMKK1Q8N5S9 505 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 CEP112Q8N8E3 955 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 RTL3Q8N8U3 475 aaKnown RBP12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 TTC13Q8NBP0 860 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 PCDH19Q8TAB3 1148 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 CSGALNACT1Q8TDX6 532 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 DDI1Q8WTU0 396 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 OSCP1Q8WVF1 389 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 P3H4Q92791 437 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 RSPRY1Q96DX4 576 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 PRICKLE1Q96MT3 831 aaPredicted RBP12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 RETREG1Q9H6L5 497 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 RRAGDQ9NQL2 400 aaPredicted RBP12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 DUS2Q9NX74 493 aaKnown RBP12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 SMARCAL1Q9NZC9 954 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 MPP6Q9NZW5 540 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 DKK4Q9UBT3 224 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 WNT6Q9Y6F9 365 aa12.35□□□□□ -0.43
SHKBP1-213ENST00000597325 A0A1B0GVM2 712 aa12.34□□□□□ -0.43
SHKBP1-213ENST00000597325 TCAF2A6NFQ2 919 aa12.34□□□□□ -0.43
SHKBP1-213ENST00000597325 DRGXA6NNA5 263 aa12.34□□□□□ -0.43
SHKBP1-213ENST00000597325 TRDMT1O14717 391 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms