RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 TSTD1Q8NFU3 115 aa19.73■□□□□ 0.75
PNKP-207ENST00000596014 EXD1Q8NHP7 514 aa19.73■□□□□ 0.75
PNKP-207ENST00000596014 MTG2Q9H4K7 406 aa19.73■□□□□ 0.75
PNKP-207ENST00000596014 POLMQ9NP87 494 aaPredicted RBP19.73■□□□□ 0.75
PNKP-207ENST00000596014 CXorf51AA0A1B0GTR3 108 aa19.72■□□□□ 0.75
PNKP-207ENST00000596014 ARHGAP42A6NI28 874 aa19.72■□□□□ 0.75
PNKP-207ENST00000596014 K7ERQ8 282 aa19.72■□□□□ 0.75
PNKP-207ENST00000596014 ATP9BO43861 1147 aa19.72■□□□□ 0.75
PNKP-207ENST00000596014 SYNCRIPO60506 623 aaKnown RBP19.72■□□□□ 0.75
PNKP-207ENST00000596014 APBB3O95704 486 aa19.72■□□□□ 0.75
PNKP-207ENST00000596014 HOXA6P31267 233 aa19.72■□□□□ 0.75
PNKP-207ENST00000596014 SERPINB6P35237 376 aa19.72■□□□□ 0.75
PNKP-207ENST00000596014 PAPOLAP51003 745 aaKnown RBP19.72■□□□□ 0.75
PNKP-207ENST00000596014 DLG2Q15700 870 aa19.72■□□□□ 0.75
PNKP-207ENST00000596014 TAZQ16635 292 aa19.72■□□□□ 0.75
PNKP-207ENST00000596014 HNRNPA1L2Q32P51 320 aaKnown RBP19.72■□□□□ 0.75
PNKP-207ENST00000596014 NCBP2-AS2Q69YL0 99 aa19.72■□□□□ 0.75
PNKP-207ENST00000596014 FRS2Q8WU20 508 aa19.72■□□□□ 0.75
PNKP-207ENST00000596014 MAK16Q9BXY0 300 aaKnown RBP19.72■□□□□ 0.75
PNKP-207ENST00000596014 TCRBV21S2A2A0A5A6 115 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 DFFAO00273 331 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 RIOK3O14730 519 aaKnown RBP19.71■□□□□ 0.75
PNKP-207ENST00000596014 SMAD6O43541 496 aaKnown RBP19.71■□□□□ 0.75
PNKP-207ENST00000596014 CD160O95971 181 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 CDKN2BP42772 138 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 CAMK2GQ13555 558 aaPredicted RBP19.71■□□□□ 0.75
PNKP-207ENST00000596014 PAFAH1B3Q15102 231 aaKnown RBP19.71■□□□□ 0.75
PNKP-207ENST00000596014 ZNF528Q3MIS6 628 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 ACCSLQ4AC99 568 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 SPOCD1Q6ZMY3 1216 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 REXO1L1PQ8IX06 675 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 PTPRN2Q92932 1015 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 PRSS16Q9NQE7 514 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 PACSIN2Q9UNF0 486 aaPredicted RBP19.71■□□□□ 0.75
PNKP-207ENST00000596014 ACTL7AQ9Y615 435 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 GOLGA6L9A6NEM1 432 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 ZSCAN5CA6NGD5 496 aaPredicted RBP19.71■□□□□ 0.75
PNKP-207ENST00000596014 MIF4GDA9UHW6 222 aaKnown RBP19.71■□□□□ 0.75
PNKP-207ENST00000596014 SP9P0CG40 484 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 PXNP49023 591 aaPredicted RBP19.71■□□□□ 0.75
PNKP-207ENST00000596014 SERPINH1P50454 418 aaKnown RBP19.71■□□□□ 0.75
PNKP-207ENST00000596014 CLCN6P51797 869 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 RWDD2BP57060 319 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 DMWDQ09019 674 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 ANO7Q6IWH7 933 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 LEKR1Q6ZMV7 388 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 PRSS33Q8NF86 280 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 ZNF592Q92610 1267 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 ALG3Q92685 438 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 RBM41Q96IZ5 413 aaKnown RBP19.71■□□□□ 0.75
PNKP-207ENST00000596014 EBF1Q9UH73 591 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 SHROOM3Q8TF72 1996 aa19.71■□□□□ 0.75
PNKP-207ENST00000596014 EDDM13A0A1B0GTR0 161 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 TARSL2A2RTX5 802 aaKnown RBP19.7■□□□□ 0.74
PNKP-207ENST00000596014 J3KR12 359 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 SIN3BO75182 1162 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 ALDH1A2O94788 518 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 TUBB4AP04350 444 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 VAV1P15498 845 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 GEMIN4P57678 1058 aaKnown RBP19.7■□□□□ 0.74
PNKP-207ENST00000596014 TCF15Q12870 199 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 LLGL1Q15334 1064 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 C9orf64Q5T6V5 341 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 SLC9A4Q6AI14 798 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 ARHGAP36Q6ZRI8 547 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 RASSF3Q86WH2 238 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 RFX6Q8HWS3 928 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 CCDC50Q8IVM0 306 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 UBL4BQ8N7F7 174 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 PLD5Q8N7P1 536 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.7■□□□□ 0.74
PNKP-207ENST00000596014 HMGB4Q8WW32 186 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 HES6Q96HZ4 224 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 PRDM16Q9HAZ2 1276 aa19.7■□□□□ 0.74
PNKP-207ENST00000596014 DMDP11532 3685 aa19.69■□□□□ 0.74
PNKP-207ENST00000596014 H0Y858 1186 aa19.69■□□□□ 0.74
PNKP-207ENST00000596014 MFSD11O43934 449 aa19.69■□□□□ 0.74
PNKP-207ENST00000596014 PRAMEF11O60813 436 aa19.69■□□□□ 0.74
PNKP-207ENST00000596014 KRT10P13645 584 aa19.69■□□□□ 0.74
PNKP-207ENST00000596014 GABRG2P18507 467 aa19.69■□□□□ 0.74
PNKP-207ENST00000596014 GBE1Q04446 702 aa19.69■□□□□ 0.74
PNKP-207ENST00000596014 TFDP3Q5H9I0 405 aa19.69■□□□□ 0.74
PNKP-207ENST00000596014 HEATR6Q6AI08 1181 aaKnown RBP19.69■□□□□ 0.74
PNKP-207ENST00000596014 MDGA1Q8NFP4 955 aa19.69■□□□□ 0.74
PNKP-207ENST00000596014 UBE2Q2Q8WVN8 375 aa19.69■□□□□ 0.74
PNKP-207ENST00000596014 NELL1Q92832 810 aa19.69■□□□□ 0.74
PNKP-207ENST00000596014 ALS2CR12Q96Q35 445 aa19.69■□□□□ 0.74
PNKP-207ENST00000596014 FAM126AQ9BYI3 521 aaPredicted RBP19.69■□□□□ 0.74
PNKP-207ENST00000596014 MKRN2Q9H000 416 aaKnown RBP19.69■□□□□ 0.74
PNKP-207ENST00000596014 KCNH6Q9H252 994 aa19.69■□□□□ 0.74
PNKP-207ENST00000596014 PDFQ9HBH1 243 aa19.69■□□□□ 0.74
PNKP-207ENST00000596014 IPO11Q9UI26 975 aaKnown RBP19.69■□□□□ 0.74
PNKP-207ENST00000596014 EML5Q05BV3 1969 aa19.69■□□□□ 0.74
PNKP-207ENST00000596014 CCDC163A0A0D9SF12 145 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 DYNC1I1O14576 645 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 APOL1O14791 398 aa19.68■□□□□ 0.74
PNKP-207ENST00000596014 DDX3YO15523 660 aaKnown RBP19.68■□□□□ 0.74
PNKP-207ENST00000596014 ZBTB24O43167 697 aaPredicted RBP19.68■□□□□ 0.74
PNKP-207ENST00000596014 ZNF821O75541 412 aaPredicted RBP19.68■□□□□ 0.74
PNKP-207ENST00000596014 FNTBP49356 437 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms